| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3953 |
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| Symbol | |
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| ID | 6873586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3788001 |
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| End bp | 3789218 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642786912 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_002217540 |
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| Protein GI | 198243187 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.515945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 96 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC CCGTCGCTGA ACCGGCGCTA AACGGATTGC GCCTCAATCT GCGTATTGTC
TCCATTGTGA TGTTTAACTT TGCCAGCTAC CTGACCATCG GCCTGCCGCT CGCCGTCTTG
CCCGGCTATG TGCATGATGC GATGGGATTC AGCGCGTTCT GGGCGGGGCT TATTATCAGC
CTGCAATACT TCGCCACTCT GTTAAGCCGT CCCCATGCCG GGCGGTATGC GGATGTATTA
GGGCCGAAAA AAATCGTTGT CTTTGGCTTA TGCGGCTGTT TTTTAAGCGG ACTCGGCTAC
CTGCTGGCGG ATATCGCCAG CGCCTGGCCG ATGATCAGTT TGTTGCTACT GGGGCTGGGT
CGCGTGATTT TGGGGATTGG GCAAAGTTTT GCCGGCACCG GTTCGACACT ATGGGGCGTC
GGCGTCGTCG GGTCGTTGCA TATTGGTCGG GTCATCTCCT GGAACGGTAT CGTCACCTAC
GGCGCAATGG CGATGGGCGC GCCGCTGGGC GTGCTGTGTT ATGCCTGGGG CGGGTTACAG
GGACTGGCGC TAACGGTGAT GGGCGTGGCG CTGTTGGCGG TACTGTTAGC CCTTCCACGT
CCGTCGGTGA AGGCGAACAA AGGCAAGCCG CTGCCGTTTC GCGCGGTGCT GGGGCGTGTC
TGGCTGTATG GTATGGCGTT GGCGCTGGCC TCGGCAGGGT TTGGCGTCAT CGCGACGTTT
ATTACCTTAT TTTATGATGC TAAAGGCTGG GATGGCGCCG CCTTTGCGCT CACGTTATTT
AGCGTCGCGT TTGTCGGCAC GCGTTTGCTG TTCCCTAACG GCATCAATCG TTTAGGCGGG
TTGAATGTCG CCATGATCTG CTTTGGCGTG GAGATTATTG GTCTGTTACT TGTGGGGACG
GCAGCCATGC CGTGGATGGC AAAAATCGGC GTTTTACTCA CGGGGATGGG GTTTTCGCTG
GTCTTTCCGG CGCTGGGCGT GGTGGCCGTC AAAGCCGTGC CGCCGCAGAA CCAGGGCGCG
GCGCTGGCGA CCTATACCGT CTTTATGGAT ATGTCTTTGG GGATTACCGG GCCGCTGGCG
GGGCTGGTGA TGACCTGGGC GGGCGTGCCG GTGATTTATC TGGCGGCAGC CGGGCTGGTA
ACGATGGCGC TATTGCTGAC TTGGCGCTTA AAAAAACGGC CTCCGTCTGC ACTGCCGGAG
GCCGCATCAT CATCGTAA
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| Protein sequence | MPEPVAEPAL NGLRLNLRIV SIVMFNFASY LTIGLPLAVL PGYVHDAMGF SAFWAGLIIS
LQYFATLLSR PHAGRYADVL GPKKIVVFGL CGCFLSGLGY LLADIASAWP MISLLLLGLG
RVILGIGQSF AGTGSTLWGV GVVGSLHIGR VISWNGIVTY GAMAMGAPLG VLCYAWGGLQ
GLALTVMGVA LLAVLLALPR PSVKANKGKP LPFRAVLGRV WLYGMALALA SAGFGVIATF
ITLFYDAKGW DGAAFALTLF SVAFVGTRLL FPNGINRLGG LNVAMICFGV EIIGLLLVGT
AAMPWMAKIG VLLTGMGFSL VFPALGVVAV KAVPPQNQGA ALATYTVFMD MSLGITGPLA
GLVMTWAGVP VIYLAAAGLV TMALLLTWRL KKRPPSALPE AASSS
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