Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3948 |
Symbol | zntA |
ID | 6875708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3782222 |
End bp | 3784420 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642786907 |
Product | zinc/cadmium/mercury/lead-transporting ATPase |
Protein accession | YP_002217535 |
Protein GI | 198242165 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGACCC CTGATACCGA TGGCAAAAAA GTCCCGCCCT TTACCTCCTT CAGATTAGCC CCGGCGATAC AGAAGGCCGA TAGCTGCTGC TGCGAAGAAC ATTGCGCGTC CAGCGCGCCT GTTTCTACTG CCGTGGCAGG CACGCGCTAT ACCTGGAAAA TCTCCGGCAT GGACTGCGCC GCCTGCGCCC GAAAAGTGGA GAATGCGGTC CGCCAAATTC GCGGCGTCAA CCAGGCGCAA GTGCTGTTCG CCACCGAAAA GTTAGTGGTC GATGCCGACG CCGACCTCCG CGCGCAAATT GAACGCGCCG TACAGAAGGC GGGTTATACC TTGCGTAGCG AAGATTCGCG CGACGCCGCG CCTGAATCTC GTCTTAAAGA GAACCTGCCG CTTATTACGC TGATCATTAT GATGGCGATA AGCTGGGGGC TGGAGCAATT TAACCACCCG TTCGGCCAAC TGGCCTTTAT CGCCACCACC CTGGTCGGTC TGTATCCTAT TGCCCGCCAG GCGCTGCGGC TGATGAAAAG CGGCAGTTGG TTCGCTATTG AAACGCTGAT GAGCGTCGCC GCCATTGGCG CGCTGTTTAT TGGCGCGACG GCGGAGGCGG CAATGGTATT GCTGCTGTTC CTCATCGGCG AGCGCCTGGA AGGATGGGCC GCCAGCCGCG CCCGTAAAGG CGTCAGCGCG TTAATGGCGC TTAAACCGGA AACGGCGACC CGTCTGCGCG ACGGCGTGCG GGAAGAGGTC GCTATTAATA CCCTGCGACC GGGCGATATT ATCGAAGTCG CCGCCGGGGG GCGTTTACCC GCCGACGGTA AACTGGTTTC CGGTTTCGCC AGCTTTGATG AAAGCGCGCT CACCGGCGAG TCTATCCCTG TGGAGCGCGC AACGGGCGAC AAAGTCCCGG CAGGCGCGAC CAGCGTTGAC CGTCTCGTCA CCCTGGAGGT GCTATCTGAA CCTGGCGCCA GCGCGATTGA CCGTATCCTG ACGCTGATTG AAGAGGCGGA AGAGCGCCGT GCGCCCATTG AGCGGTTTAT TGACCGTTTC AGCCGCATCT ATACGCCAGT CATTATGGTC ATCGCGCTGC TGGTGACGCT TATTCCGCCG CTGATGTTCG AGGGCGGCTG GCAGGAGTGG ATTTATAAAG GGCTGACGCT GCTGCTCATC GGTTGCCCGT GCGCGCTGGT GATCTCCACG CCCGCGGCCA TTACCTCCGG GCTGGCGGCG GCGGCACGGC GCGGCGCATT GATTAAAGGC GGCGCAGCGC TGGAGCAACT GGGCCGTATC ACGCAGGTCG CCTTTGATAA AACCGGTACG TTGACCATTG GTAAACCACG GGTGACGGCG ATTCATCCGG CAAGCGGTAT CAGCGAGGCT GAACTGTTGG CGCTGGCGGC AGCCGTAGAA CAAGGCGCTA CGCACCCGCT GGCGCAGGCT ATTGTCCGCG AAGCGCAGAC ACGCGATCTG GCGATCCCGA CGGCGGAATC GCAGCGAACG CTGGCCGGCA CCGGAATTGA AGCGCAGGTT AACGGCGAAC GTATTCTGAT TTGCGCGGCG GGAAAACAGC CTACGGCAGC GTTTGCCGGG CAAATTAGCG AACTGGAAAA CGCCGGGCAG ACGGTGGTTC TGGTGCTGCG TAACGAGACC GTTGTTGGCG TCCTCGCCCT CCAGGATACG TTGCGTGACG ATGCGCGCGA CGCCATCCGC GAACTGCATC AGTTAGGCGT TAACGGCGTG ATTCTGACCG GCGATAACCC ACGGGCGGCG GCAGCGATTG CCGGCGAGCT GGATCTGGCG TTTAAAGCCG GACTACTGCC GGAAGACAAG GTGCGGGCAG TCACCGCCCT TAACCAACAA GCGCCGCTGG CGATGGTGGG CGACGGCATT AATGATGCGC CCGCGATGAA AGCCGCCAGT ATCGGAATTG CGATGGGCAG CGGTACTGAC GTCGCGCTGG AAACGGCTGA CGCCGCCCTT ACTCATAACC GTCTGCGCGG GTTAGCGCAG ATGATTACGC TGGCGCGCGC TACCCACGCG AATATCCGGC AGAACATCAC CATTGCGCTG GGGCTGAAAG CCATTTTCCT GGTGACGACG CTACTTGGTT TTACCGGGCT ATGGCTGGCA ATCCTGGCGG ATACGGGAGC CACGGTATTG GTGACCGCCA ACGCGCTACG TTTGCTGCGT AAAAACTAA
|
Protein sequence | MSTPDTDGKK VPPFTSFRLA PAIQKADSCC CEEHCASSAP VSTAVAGTRY TWKISGMDCA ACARKVENAV RQIRGVNQAQ VLFATEKLVV DADADLRAQI ERAVQKAGYT LRSEDSRDAA PESRLKENLP LITLIIMMAI SWGLEQFNHP FGQLAFIATT LVGLYPIARQ ALRLMKSGSW FAIETLMSVA AIGALFIGAT AEAAMVLLLF LIGERLEGWA ASRARKGVSA LMALKPETAT RLRDGVREEV AINTLRPGDI IEVAAGGRLP ADGKLVSGFA SFDESALTGE SIPVERATGD KVPAGATSVD RLVTLEVLSE PGASAIDRIL TLIEEAEERR APIERFIDRF SRIYTPVIMV IALLVTLIPP LMFEGGWQEW IYKGLTLLLI GCPCALVIST PAAITSGLAA AARRGALIKG GAALEQLGRI TQVAFDKTGT LTIGKPRVTA IHPASGISEA ELLALAAAVE QGATHPLAQA IVREAQTRDL AIPTAESQRT LAGTGIEAQV NGERILICAA GKQPTAAFAG QISELENAGQ TVVLVLRNET VVGVLALQDT LRDDARDAIR ELHQLGVNGV ILTGDNPRAA AAIAGELDLA FKAGLLPEDK VRAVTALNQQ APLAMVGDGI NDAPAMKAAS IGIAMGSGTD VALETADAAL THNRLRGLAQ MITLARATHA NIRQNITIAL GLKAIFLVTT LLGFTGLWLA ILADTGATVL VTANALRLLR KN
|
| |