Gene SeD_A3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3944 
Symbol 
ID6871236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3780711 
End bp3780980 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content49% 
IMG OID642786903 
Producthypothetical protein 
Protein accessionYP_002217531 
Protein GI198243217 
COG category[S] Function unknown 
COG ID[COG3776] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.661127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTA ATCTGGGCCG CTTATTAATG CTCTTCGTGT GGGCATTTTT GATTCTTAAT 
CTGGTGCATC CCTTCCCGCG CCCGCTCAAT ATCTTCGTCA ACGTGGCGTT GGTGTTCATG 
GCGCTGATGC ACGGTATGCA ACTGGCGCTA CTGAAATCAA CGATACCGAA AGCGGGTCCG 
CAGATGACGA CGGGAGAGAA AATCCGCATT TTCCTGTTCG GCGTGTTTGA GCTGCTGGTC 
TGGCAGAAGA AGTTTAAGAA CAAAAAATAA
 
Protein sequence
MLINLGRLLM LFVWAFLILN LVHPFPRPLN IFVNVALVFM ALMHGMQLAL LKSTIPKAGP 
QMTTGEKIRI FLFGVFELLV WQKKFKNKK