| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3943 |
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| Symbol | rsmD |
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| ID | 6871969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3780098 |
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| End bp | 3780721 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642786902 |
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| Product | 16S rRNA m(2)G966-methyltransferase |
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| Protein accession | YP_002217530 |
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| Protein GI | 198242017 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0742] N6-adenine-specific methylase |
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| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.639432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCAACAGG CGGTTCGAGC AAGAGAAATG AAAAAACCGA CTCACTCTGG CAGCGGCCAA
ATCCGCATTA TTGGCGGGCA ATGGCGTGGC CGTAAATTAC CGGTTCCGGA CAGCCCGGGT
CTGCGTCCCA CCACCGATCG CGTGCGCGAA ACGTTATTTA ACTGGCTGGC TCCGGTAATG
GTAGACGCCC ATTGTCTGGA TTGCTTTGCC GGCAGCGGCG CGCTGGGTCT GGAAGCGCTA
TCACGTTATG CGGCCCAGGC AACGTTACTG GAAATGGATC GCGCCGTATC GCAGCAGTTG
CAAAAAAATC TGGCGACGCT GAAAGCCAAC AATGCTCGCG TCGTCAATAC CAATACTCTG
ACCTTCCTCA GCCAGCCGGG GACGCCGCAT CACGTCGTCT TTGTCGACCC GCCGTTTCGT
AAAGGGCTGC TGGAAGAGAC GTTACAATTG CTGGAAACCC AGGGATGGCT GGCCGACGAC
GCGCTAATCT ACGTAGAAAG CGAGGTGGAA AACGGTCTGC CGCCCGTTCC GGCGAACTGG
GCATTGTATC GAGAAAAGGT GGCCGGACAG GTCGCTTATC GTCTGTATCA GCGCGACGCG
CAAGGAGAAA ATGATGTTGA TTAA
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| Protein sequence | MQQAVRAREM KKPTHSGSGQ IRIIGGQWRG RKLPVPDSPG LRPTTDRVRE TLFNWLAPVM
VDAHCLDCFA GSGALGLEAL SRYAAQATLL EMDRAVSQQL QKNLATLKAN NARVVNTNTL
TFLSQPGTPH HVVFVDPPFR KGLLEETLQL LETQGWLADD ALIYVESEVE NGLPPVPANW
ALYREKVAGQ VAYRLYQRDA QGENDVD
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