| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3939 |
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| Symbol | rpoH |
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| ID | 6872310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3775705 |
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| End bp | 3776559 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642786898 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_002217526 |
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| Protein GI | 198244039 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAG AAATGCAAAA TTTAGCTTTA GCCCCTGTTG GCAACCTGGA ATCTTATATC
CGGGCGGCGA ACGCGTGGCC GATGTTATCG GCTGACGAGG AGCGGGCATT GGCTGAAAGG
CTGCATTACC AGGGCGATCT GGAAGCAGCT AAAACGCTGA TCCTGTCTCA CCTGCGCTTT
GTTGTTCATA TTGCTCGTAA CTATGCGGGC TATGGTCTGC CGCAGGCGGA TTTGATCCAG
GAAGGCAACA TCGGCCTGAT GAAAGCCGTA CGTCGTTTTA ACCCGGAAGT AGGCGTGCGC
CTGGTTTCCT TCGCCGTACA CTGGATTAAA GCAGAAATTC ACGAATACGT GCTGCGTAAC
TGGCGTATCG TTAAAGTCGC AACCACGAAA GCGCAGCGTA AGCTGTTCTT TAATCTGCGT
AAAACCAAGC AGCGTCTGGG CTGGTTTAAT CAGGATGAGG TTGAAATGGT GGCGCGCGAA
CTGGGTGTTT CCAGTAAAGA CGTGCGTGAG ATGGAGTCGC GTATGGCGGC GCAGGACATG
ACGTTTGACA TGTCTTCGGA CGATGAGTCC GACAGCCAGC CAATGGCGCC GGTGCTGTAT
CTGCAGGATA AATCGTCTAA CTTTGCCGAC GGCATTGAAG ACGATAACTG GGAAGAGCAG
GCCGCCAACC GACTGACCGA CGCGATGCAG GGGCTCGACG AGCGTAGCCA GGATATTATC
CGCGCTCGCT GGCTGGACGA AGACAATAAG TCTACGTTGC AGGAGCTGGC CGATCGTTAC
GGCGTCTCCG CTGAGCGTGT GCGCCAGCTT GAAAAGAACG CCATGAAAAA GCTTCGCGCT
GCGATCGAAG CGTAA
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| Protein sequence | MTKEMQNLAL APVGNLESYI RAANAWPMLS ADEERALAER LHYQGDLEAA KTLILSHLRF
VVHIARNYAG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKQRLGWFN QDEVEMVARE LGVSSKDVRE MESRMAAQDM
TFDMSSDDES DSQPMAPVLY LQDKSSNFAD GIEDDNWEEQ AANRLTDAMQ GLDERSQDII
RARWLDEDNK STLQELADRY GVSAERVRQL EKNAMKKLRA AIEA
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