Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3934 |
Symbol | livH |
ID | 6871245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3771184 |
End bp | 3772110 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642786893 |
Product | branched-chain amino acid transporter permease subunit LivH |
Protein accession | YP_002217521 |
Protein GI | 198243928 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGC AGTTTCTCTA TTTCTTGCAG CAGATGTTTA ACGGCGTCAC GCTGGGGAGC ACCTACGCGC TGATTGCTAT CGGTTATACG ATGGTGTACG GCATTATCGG CATGATCAAC TTCGCTCATG GCGAGGTGTA TATGATCGGC AGCTACGTCT CTTTTATGAT CATCGCCGCG CTAATGATGA TGGGAATAGA CACCAGTTGG CTCCTGGTGG CCGCCGGATT TATCGGCGCG ATTATTATTG CCAGCGCCTA CGGCTGGAGT ATCGAGCGAG TCGCTTACCG GCCCGTGCGC AACTCCAAGC GCCTGATTGC CCTGATTTCC GCCATCGGGA TGTCCATCTT CCTGCAAAAC TACGTCAGCC TGACGGAAGG TTCGCGCGAC GTGGCGTTAC CCAGCCTGTT TAACGGCCAG TGGATTGTGG GCAGCAGCGA AAACTTTTCC GCGTCCATCA CCACCATGCA GGCGGTTATC TGGATAGTCA CCTTTCTGGC TATGCTGGCG CTCACCATTT TCATTCGCTA CTCCCGGATG GGCCGCGCCT GCCGCGCCTG CGCGGAGGAT CTGAAAATGG CCAGCCTGCT CGGCATTAAT ACCGACCGCG TCATTGCGCT AACGTTTGTT ATCGGCGCGG CAATGGCGGC GGTGGCGGGC GTGCTGCTCG GTCAGTTCTA TGGCGTAATT AACCCCTACA TCGGTTTTAT GGCCGGGATG AAAGCGTTCA CCGCGGCGGT GCTGGGCGGT ATTGGCAGCA TCCCGGGCGC GATGATCGGC GGTCTGATTT TGGGCGTTGC CGAAGCGCTC TCGTCTGCAT ATTTAAGTAC CGAATATAAA GATGTCGTAT CGTTCGCTCT GCTGATTCTG GTACTGCTGG TGATGCCGAC CGGTATCCTG GGGCGTCCGG AGGTAGAGAA AGTATGA
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Protein sequence | MSEQFLYFLQ QMFNGVTLGS TYALIAIGYT MVYGIIGMIN FAHGEVYMIG SYVSFMIIAA LMMMGIDTSW LLVAAGFIGA IIIASAYGWS IERVAYRPVR NSKRLIALIS AIGMSIFLQN YVSLTEGSRD VALPSLFNGQ WIVGSSENFS ASITTMQAVI WIVTFLAMLA LTIFIRYSRM GRACRACAED LKMASLLGIN TDRVIALTFV IGAAMAAVAG VLLGQFYGVI NPYIGFMAGM KAFTAAVLGG IGSIPGAMIG GLILGVAEAL SSAYLSTEYK DVVSFALLIL VLLVMPTGIL GRPEVEKV
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