Gene SeD_A3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3931 
SymbollivF 
ID6875423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3768431 
End bp3769144 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content60% 
IMG OID642786890 
Productleucine/isoleucine/valine transporter ATP-binding subunit 
Protein accessionYP_002217518 
Protein GI198242800 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA CGATGTTAAC GTTTGAAAAA GTCAGCGCCC ACTACGGCAA GATTCAGGCG 
CTGCACGACG TCAGTCTGCA CATCAACCAG GGGGAAATCG TTACCCTGAT TGGCGCTAAC
GGCGCGGGGA AAACGACGCT GCTTGGCACC TTGTGCGGCG ATCCGCGCGC CTCCAGCGGA
CGGGTGGTGT TTGACGGTAA AGACATCACC GACTGGCAGA CGGCGAAAAT CATGCGTGAA
GCGGTGGCGA TAGTGCCGGA AGGGCGGCGC GTCTTCTCGC GGATGACGGT AGAAGAGAAC
CTGGCGATGG GCGGTTTTTT TGCCGAGCGC GATCGGTTTC AGGAGCGTAT CAAATGGGTG
TACGAGCTGT TTCCGCGCCT GCATGAACGC CGTATCCAGC GAGCGGGCAC CATGTCCGGT
GGCGAACAGC AGATGCTGGC GATTGGCCGC GCGCTGATGA GCCAGCCGAG GCTATTGCTG
CTGGATGAAC CGTCGCTGGG GCTGGCGCCG ATCATCATCC AGCAGATCTT CGACACCATT
GAGCAGTTGC GCGAGCAGGG TATGACCATC TTCCTTGTCG AGCAGAACGC CAACCAGGCG
CTGAAGCTCG CCGACCGCGG TTATGTGCTG GAAAACGGCC ACGTGGTGCT ATCCGATACC
GGTGATGCGC TGCTGGCGAA CGAAGCGGTG CGCAGCGCCT ATCTGGGCGG TTAG
 
Protein sequence
MEKTMLTFEK VSAHYGKIQA LHDVSLHINQ GEIVTLIGAN GAGKTTLLGT LCGDPRASSG 
RVVFDGKDIT DWQTAKIMRE AVAIVPEGRR VFSRMTVEEN LAMGGFFAER DRFQERIKWV
YELFPRLHER RIQRAGTMSG GEQQMLAIGR ALMSQPRLLL LDEPSLGLAP IIIQQIFDTI
EQLREQGMTI FLVEQNANQA LKLADRGYVL ENGHVVLSDT GDALLANEAV RSAYLGG