Gene SeD_A3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3919 
Symbol 
ID6872058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3757353 
End bp3758114 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content43% 
IMG OID642786878 
Producthypothetical protein 
Protein accessionYP_002217506 
Protein GI198245403 
COG category[S] Function unknown 
COG ID[COG5426] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.968045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA CGCAGAAAAA ACTAAAGGTG CTCTTTATTG GAGAATCCTG GCATATTCAT 
ATGATTCATT CAAAAGGTTA TGACAGTTTC ACCTCCAGTA AATATGAAGA AGGCGCTACA 
TGGTTACTGG AATGCTTGAG GAAAGGCGGC GTTGATATTG ATTACATGCC TGCCCACACG 
GTACAAATTG CCTTTCCAGA GAGTATTGAC GAATTAAACC GTTACGATGT GATTGTTATT 
AGCGACATTG GTAGTAATAC CTTCCTGTTG CAAAACGAGA CATTTTATCA GCTAAAAATA 
AAACCAAACG CTCTGGAGTC CATTAAAGAG TACGTCAAAA ATGGCGGTGG ACTACTCATG 
ATTGGCGGTT ATCTGTCATT TATGGGTATT GAGGCAAAAG CCAATTATAA GAACACCGTT 
CTTGCTGAGG TTCTGCCAGT TATTATGCTT GATGGCGATG ACCGGGTAGA AAAGCCAGAG 
GGTATCTGTG CTGAGGCTGT CTCACCTGAA CATCCTGTTG TTAACGGGTT CTCAGATTAT 
CCAGTATTTC TTGGATATAA CCAGGCCGTC GCCAGAGACG ATGCCGATGT CGTATTAACA 
ATAAATAATG ACCCATTGTT AGTGTTCGGT GAATACCAAC AGGGTAAAAC CGCCTGCTTT 
ATGAGTGACT GCTCCCCACA CTGGGGAACC CAGCAGTTTA TGTCATGGCC ATTTTATACC 
GACCTGTGGG TCAACACGCT TCAATTCATC GCCAGAAAAT AA
 
Protein sequence
MNNTQKKLKV LFIGESWHIH MIHSKGYDSF TSSKYEEGAT WLLECLRKGG VDIDYMPAHT 
VQIAFPESID ELNRYDVIVI SDIGSNTFLL QNETFYQLKI KPNALESIKE YVKNGGGLLM 
IGGYLSFMGI EAKANYKNTV LAEVLPVIML DGDDRVEKPE GICAEAVSPE HPVVNGFSDY 
PVFLGYNQAV ARDDADVVLT INNDPLLVFG EYQQGKTACF MSDCSPHWGT QQFMSWPFYT 
DLWVNTLQFI ARK