Gene SeD_A3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3914 
Symbol 
ID6875246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3753866 
End bp3754903 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content50% 
IMG OID642786874 
Productputative dehydrogenase 
Protein accessionYP_002217502 
Protein GI198244027 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.465022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTAC ACTGCGCATT TATTGGATTC GGCAAAAGTA CCACCCGTTA CCATCTCCCC 
TATGTTCTGA ATCGGAAAGA TACCTGGCAT GTCGCGCATA TTTTCCGTCG TCACGCTAAA
CCGGAAGAGC AGGCGCCGCA GTATTCGCAT ATTCACTTCA CCAGCGATCT GGATGAGGTG
TTGGGCGATC CGCAGGTAAA ACTGGTGATC GTCTGTACGC ATGCTGACAG CCATTTCGAA
TACGCTAAAC GCGCGCTGGA AGCGGGTAAA AATGTGCTGG TTGAGAAACC TTTCACGCCG
ACGCTGGCGG AGGCAAAAGT GTTGTTCGAC CTGGCGCGAA GCAAAGGACT GACCGTCACG
CCGTATCAGA ATCGGCGTTT TGATTCCTGT TTTCTTACTG CTAAAAAAGC GATTGAGAGC
GGGAAACTGG GCAAGATTGT CGAAATTGAA AGCCATTTCG ATTATTACCG CCCGGTAGCA
GAAACCAAAC CGGGCCTGCC GCAGGACGGC GCATTCTATG GACTTGGCGT CCACACCATG
GATCAAATTA TTTCGCTATT TGGCCGTCCG GATCATGTCG CGTATGACAT TCGTAGCCTG
CGTAATAAAG CGAATCCGGA TGACACCTTT GAAGCGCAAC TGTTTTATGG CGATTTGAAG
GCTATCGTTA AAACCAGCCA TCTGGTGAAA ATTGACTATC CGAAGTTTAT TGTTCACGGC
ACCAAAGGTT CGTTTGTGAA ATACGGTATC GATCAACAAG AAACCAGCCT GAAAGCGAAC
ATTATGCCCG GTGAACCCGG TTTCGCCGCT GACGAATCCG TCGGCGTGCT GGAATATGTT
AACGATGACG GCGTGACCGT GAAAGAAGAG GTGAAACCGG AAACGGGTGA CTATGGTCGC
GTCTATGATG CGCTGTACCA GACGTTGACC GTCGGTATGC CTAATTACGT CAAGGAATCT
GAAGTTCTTA CCAACCTGGA AATCCTCGAG CGTGCTTTCG AACAGGCATC GCCTGCGACG
ATAACCCTCG CTAAATAG
 
Protein sequence
MTLHCAFIGF GKSTTRYHLP YVLNRKDTWH VAHIFRRHAK PEEQAPQYSH IHFTSDLDEV 
LGDPQVKLVI VCTHADSHFE YAKRALEAGK NVLVEKPFTP TLAEAKVLFD LARSKGLTVT
PYQNRRFDSC FLTAKKAIES GKLGKIVEIE SHFDYYRPVA ETKPGLPQDG AFYGLGVHTM
DQIISLFGRP DHVAYDIRSL RNKANPDDTF EAQLFYGDLK AIVKTSHLVK IDYPKFIVHG
TKGSFVKYGI DQQETSLKAN IMPGEPGFAA DESVGVLEYV NDDGVTVKEE VKPETGDYGR
VYDALYQTLT VGMPNYVKES EVLTNLEILE RAFEQASPAT ITLAK