Gene SeD_A3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3913 
Symbol 
ID6874707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3753047 
End bp3753742 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content55% 
IMG OID642786873 
Producthypothetical protein 
Protein accessionYP_002217501 
Protein GI198245774 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.356203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTACT TACGCAAAGC AAACGACCGC GGTCATGCGA ATCATGGCTG GCTTGACTCC 
TGGCATACTT TTTCTTTTGC CGATTATTAC GATCCGAACT TTATGGGGTT CTCGGCGCTG 
CGTGTGATTA ACGACGATGT GATCGACGCA GGCCAGGGGT TCGGCACGCA TCCGCATAAA 
GACATGGAAA TTTTGACCTA TGTGCTGGAA GGTGCCGTAG AACACCAGGA CAGTATGGGC 
AATAAAGAAC AGGTTCCGGC CGGTGAATTC CAGATTATGA GCGCCGGGAC CGGCGTTCGC 
CACTCCGAGT ACAACCCGAG CAAAACGGAT CGTCTGCGGC TGTACCAGAT CTGGATCATT 
CCGCAAGAAA CCGGCATCAC GCCGCGCTAC GAACAGCGTC GCTTCGACGC CGCGCAGGGC 
AAGCAACTGG TGCTTTCGCC AGATGCTCGC GATGGTTCGC TGAAGGTCCA CCAGGATATG 
GAGCTGTACC GCTGGGCGCT GCTCAAAGAT GAGCAGTCGG TGCATCAGAT TGCCGCTGAG 
CGCCGCGTCT GGATACAGGT GGTAAAAGGT AACGTGACTA TTAACGGTAC TAAAGCCACC 
ACCAGCGATG GCCTGGCGAT TTGGGATGAG CAGGCAATCT CGATTCATGC CGACAGCGAC 
AGCGAAGTGT TACTGTTTGA CCTGCCGCCA GTCTAA
 
Protein sequence
MIYLRKANDR GHANHGWLDS WHTFSFADYY DPNFMGFSAL RVINDDVIDA GQGFGTHPHK 
DMEILTYVLE GAVEHQDSMG NKEQVPAGEF QIMSAGTGVR HSEYNPSKTD RLRLYQIWII 
PQETGITPRY EQRRFDAAQG KQLVLSPDAR DGSLKVHQDM ELYRWALLKD EQSVHQIAAE 
RRVWIQVVKG NVTINGTKAT TSDGLAIWDE QAISIHADSD SEVLLFDLPP V