Gene SeD_A3903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3903 
Symbol 
ID6872394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3737732 
End bp3738487 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content51% 
IMG OID642786863 
Productputative transcriptional regulator 
Protein accessionYP_002217491 
Protein GI198242312 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.575083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.758857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TTACGACATC TATTCCGGCT CTCGATAAAA TTATGCGCGT ATTTGCTTAC 
CTTCTGGAGT GCGATGGCGC AACGTTTACC CAGATCCATC AAAATTCAGG GATTGCGAAA 
AGCAGTACCT CATCTTTGCT CAACGGCATG GTGGAGCATG GGTTATTACG CCAGGAAAAA 
GACAAGTATT ATCTGGGGCT ACGCCTGTAT GAATTAGGTA ATAAAGCGGC GGAACAGTAT 
GACATTAAAA AAATCGCGTT ACCGATTCTT GAAGAGATTC GCGATAACAC CGGCCTGACC 
TGCCATCTTG GCGTTCTGGA GGGCGATGCC CCCATTTATC TTCTGAAAGT CGAAAGCCCA 
CAGGCTATTG TGATTCGAAG CTGGGAGGGC AAGCGCCTCT CATTACATAG CTCAGGGCTG 
GGGAAGGTGC TGATTGCATG GCTTAGCGGG GAAGAGCTGG AGGAGTTGCT GCCTCCAGAT 
CAGATATTAA CGCGTTTTAC GGATACGACG ATCACAGATG TGAATATCCT TAAGCAGGAG 
TTAGCAGGAA TTCGCCGTCG CGGCTGGGGT TATGATAACG AAGAAGACTC CCTTGGCGTG 
CGCTGCATTG CGGTGCCGGT ATTCAATACG CAGGGGAAAG TGATCGCCGC CCTGAGCGTA 
TCCGGCGTTA CGTTCCAGAT CCCCGATGAT AAACGCGAGT CGCTTGCTAC GCTGATGATG 
GATGCCAGCC GTAGCCTGAC GCGTCTGATG TGCTGA
 
Protein sequence
MKKITTSIPA LDKIMRVFAY LLECDGATFT QIHQNSGIAK SSTSSLLNGM VEHGLLRQEK 
DKYYLGLRLY ELGNKAAEQY DIKKIALPIL EEIRDNTGLT CHLGVLEGDA PIYLLKVESP 
QAIVIRSWEG KRLSLHSSGL GKVLIAWLSG EELEELLPPD QILTRFTDTT ITDVNILKQE 
LAGIRRRGWG YDNEEDSLGV RCIAVPVFNT QGKVIAALSV SGVTFQIPDD KRESLATLMM 
DASRSLTRLM C