Gene SeD_A3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3902 
Symbol 
ID6872992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3736783 
End bp3737688 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID642786862 
Productdihydrodipicolinate synthetase 
Protein accessionYP_002217490 
Protein GI198243099 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGA TTACGAAATT TCACGGCGTA TTTCCGCCAG TTCCGACCAT TGTTAATGCG 
CAGGGAGAGT TAGATAAAGT CGGCATGGCA ACCTTGCTGG ATCATCTTAT TGCAAGCAAG
GTCAATGGCG TATTACTGCT GGGCAGCGGG GGGGAATTTT GCCATATGAC CAATGCGCTG
CGTCTGGAAA CCGCAGAGTT TTGCGTCCGT CATATTAACC GCCGTATTCC AGTACTATTA
GGTATTAGCA GCACCAGCAC GCAGGAAGTG ATTGAGTATG GTCAGCATGC CGACCGACTC
GAAGTCGATG CCGTGCTGGT ACTCAATCCC TACTATGCCA GATTGACCGA TGAGTATATT
TATCATCATT TCAAAACCGT GGCTAATAAC ATAAAAAGCC CGGTCATTCT CTACAACTTT
CCAGCATTGA CGGGACAGGA CCTTAGCGTT GATTTAATTA CCCGGCTGGC GCAGGATCAC
CCCAATATTA TCGGCATTAA GGATACCGTT GATAATATCA GCCATATTCG TGAAATCATC
AATAATGTCA GGCCAGTGCG TCCGGACTTC GTTATTTTCT CCGGCTATGA TGAATATATG
ATGGATACAC TTATCTTAGG CGGCAACGGC GGGATCCCAG CGACAGCGAA CTTTGCGCCG
CAGCTAACCT GCGGGATCTA CCGCGCGTGG TGTGAAAAAG AGTATGAGAC AATGTTCGGA
TTACAGCGCC GGCTGTCCGC GCTTTCCACT ATTTACAGCC TGGATTCACC TTTCTTCGGG
ATAATCAAAA AGGCAATTCA GCTTAGCGGA GTCGATATTT CAACTCATGT AATGCCCCCC
GTTTTGCCGG CAAATGAAGA ACATATTTCG AATTTGAAGC AGATCTTACA GCGTGCGGGA
CTTTAA
 
Protein sequence
MTQITKFHGV FPPVPTIVNA QGELDKVGMA TLLDHLIASK VNGVLLLGSG GEFCHMTNAL 
RLETAEFCVR HINRRIPVLL GISSTSTQEV IEYGQHADRL EVDAVLVLNP YYARLTDEYI
YHHFKTVANN IKSPVILYNF PALTGQDLSV DLITRLAQDH PNIIGIKDTV DNISHIREII
NNVRPVRPDF VIFSGYDEYM MDTLILGGNG GIPATANFAP QLTCGIYRAW CEKEYETMFG
LQRRLSALST IYSLDSPFFG IIKKAIQLSG VDISTHVMPP VLPANEEHIS NLKQILQRAG
L