Gene SeD_A3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3898 
Symbol 
ID6871412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3730592 
End bp3732088 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content51% 
IMG OID642786858 
Productputative periplasmic phosphate-binding protein 
Protein accessionYP_002217486 
Protein GI198246169 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.64828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.815113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG CTAAGTGGCT TTTTTTGTCA ATCATGATGG CGTTTATCGG CGTGCCGCTG 
CTGGTGAACA TTATTACGAT TATCGTGGGG GGAATGTGGG CGTGCATTAG CGTTCTTGAA
AATAGTATCC CCGTCGCGCA ATCTATTGAG AAGGCGACCA TTATCCCGGT AGCGCTTCTG
GGCGCAGGGT TAATTTTTCT TTGTGGCCGA ATATGGGGAA AGGGAAATGC ATCAGAGGTA
AATCCAGAAT GGCGTGATTG CTGCCTGCTT ATGCCCGCTC TGGTGGTGCT GATGGGGTGG
GTCATCCTGA TGTTTCTCAC CGATCTTAAT ATTCGCGCGA TAGGGCGTAA ACCCATCGCC
CAGGTGGTGC AAACGCTTTG GTTAGTACCC AGCGTAATAT CCTTTTTCAA CGGCTGGGTA
TGGGCAGTGT TGCTCATCCC GGTTGGCTCG CAGCTCTGTT TTGCATTGGG GTATGGCGGT
GCGCGTTGGG GAGTGCTACG CGGCGGTGCG GGCTACTCTT GTCGTAATCT GCTGGTGATT
TGCCTGCTGT TTTTCGGGAG CTGTGCCGTA TACCAGTCAC ATCTTTATGC CGTGAAGTAT
CCCGCTCCCG AGAGCAGTGA ATATCTTTAT TTCCGCGATT ATCAGGCGCA CACATGGGGC
AACAAGCTAA CCGGGCTGCG CGATGAACCG ACACTTTTGC TCACCCAAAA TTGGCCGCGG
CTCGATGGCG CAACGGCTGG CTTGCCGTTA TACGCCTCGG CTTTTTATGC GCTTACGCGC
TTTCCGGATG ATATCTGCCC TGAAGACTAC CTTGAAAACC AGGGAACCAT TGAAGCCTAT
CAAAATATCC TTAACGGTAA TGCCGATCTT ATTTTTGTCG CCCAGCCTTC CACTGCTCAA
AAGCAATTGG CCGAGGCCAG TGGCGTAAAA CTGGTTTACA CCCCCTTTGC ACGTGAAGCG
TTTGTGTTTA TCGTCAACCA AAACAATCCC GTGTCATCGT TGAGTGATGT ACAAATTCGC
GGCATTTTTA GCGGAAGAAT CACCCACTGG AATGAGGTGG GCGGAGAGGC AATCGACATT
AAGCCCTGGC AGCGACCGGA AAACTCTGGC AGCCAAACGG CGATGCTGGC GAAGGTAATG
AAAGAAACGA AGCTGATGCC AGCGCAAACA ACATCAGTGG CAACCGCGAT GGGGGATATG
GTGGATATCG TGGCTGAGTA TCGCAATACG CACAACGCCA TTGGCTATAC CTTTCGTTAT
TACGCTACGC AGATGCACAG CAATAAAGAG ATTAAATTAC TGGCGATAAA CGATGTTGCG
CCGACGGTTG AAAATATTCG TAACGGCAGT TACCCGTACA CGGTTGATGT TTATATGGTC
ACCCGTGAAC ACCCCACAGC GGAAACACAA AAGCTGGTGG ACTGGTTTCT AAGCCCGCAG
GGACAACAGT TGGTGCAGGA TGTGGGATAT GTGCCGCTGT ATCCGGCCGC GAAATAA
 
Protein sequence
MKNAKWLFLS IMMAFIGVPL LVNIITIIVG GMWACISVLE NSIPVAQSIE KATIIPVALL 
GAGLIFLCGR IWGKGNASEV NPEWRDCCLL MPALVVLMGW VILMFLTDLN IRAIGRKPIA
QVVQTLWLVP SVISFFNGWV WAVLLIPVGS QLCFALGYGG ARWGVLRGGA GYSCRNLLVI
CLLFFGSCAV YQSHLYAVKY PAPESSEYLY FRDYQAHTWG NKLTGLRDEP TLLLTQNWPR
LDGATAGLPL YASAFYALTR FPDDICPEDY LENQGTIEAY QNILNGNADL IFVAQPSTAQ
KQLAEASGVK LVYTPFAREA FVFIVNQNNP VSSLSDVQIR GIFSGRITHW NEVGGEAIDI
KPWQRPENSG SQTAMLAKVM KETKLMPAQT TSVATAMGDM VDIVAEYRNT HNAIGYTFRY
YATQMHSNKE IKLLAINDVA PTVENIRNGS YPYTVDVYMV TREHPTAETQ KLVDWFLSPQ
GQQLVQDVGY VPLYPAAK