Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3893 |
Symbol | |
ID | 6871183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3726199 |
End bp | 3726957 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642786853 |
Product | DNA-binding transcriptional repressor GlpR |
Protein accession | YP_002217481 |
Protein GI | 198244823 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.256044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA CACAACGGCA TGACGCGATC ATTGAACTGG TAAAAAAACA GGGGTACGTC AGTACGGAAG AGCTGGTGGA GCATTTTTCT GTCAGCCCGC AAACCATTCG TCGGGATCTT AACGATCTGG CGGAACAGAA TATGATTTTG CGCCACCACG GCGGCGCGGC GTTGCCCTCC AGCTCGGTGA ACACGCCGTG GCACGATCGT AAGGCGACGC AAACGGAAGA AAAAGAGCGC ATCGCTCGCA AAGTCGCGGC CCAGATCCCC AATGGTTCAA CGCTGTTTAT TGATATCGGC ACGACGCCGG AAGCCGTAGC GCACGCCCTG TTAGGGCACA GTAATTTGCG GATCGTGACC AACAATTTGA ACGTAGCGAA CACGCTAATG GCGAAAGAGG ATTTTCGTAT TATCCTCGCC GGCGGTGAAC TCCGTAGCCG CGACGGCGGC ATTATTGGCG AAGCGACGCA GGACTTTATC GCCCAGTTCC GTCTCGATTT CGGCATTCTC GGTATTAGCG GTATTGATAG CGACGGCTCG TTGCTGGAAT TTGACTACCA TGAGGTACGC ACCAAGCGCG CGATTATCGA AAATTCGCGC CACGTGATGC TGGTGGTGGA TCACTCTAAA TTTGGCCGTA ACGCGATGGT AAACATGGGC AGCATTAGTA TGGTCGATGC GGTCTACACC GATACCCTGC CGCCGCCGGG CGTGATGCAG GTGTTGACGG AGAACCATAT TCAACTGGAG CTGTGTTAA
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Protein sequence | MKQTQRHDAI IELVKKQGYV STEELVEHFS VSPQTIRRDL NDLAEQNMIL RHHGGAALPS SSVNTPWHDR KATQTEEKER IARKVAAQIP NGSTLFIDIG TTPEAVAHAL LGHSNLRIVT NNLNVANTLM AKEDFRIILA GGELRSRDGG IIGEATQDFI AQFRLDFGIL GISGIDSDGS LLEFDYHEVR TKRAIIENSR HVMLVVDHSK FGRNAMVNMG SISMVDAVYT DTLPPPGVMQ VLTENHIQLE LC
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