Gene SeD_A3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3891 
Symbol 
ID6873343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3722876 
End bp3724429 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content60% 
IMG OID642786851 
Product60-kDa SS-A/Ro ribonucleoprotein 
Protein accessionYP_002217479 
Protein GI198245441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATC CACTTTTGTT CCGTTCGCTG TTAAGGGACG CGCCGCTGGC CAACGCCAGC 
AATCAGCAAG GCGCAGCGGC CTTCGCCTTC ACCCCACGCC ATACACTGGC GCAAATGGTG
ATGACCGGCT GCATGAACGA GACTTTTTAT GTCAGCGGCC AGGCGCAGCT AAATGATGTT
CTGGCGACAG CGAAAGATCT CGACGATCTG TTTTTAGCGC AACTGGCGAT TTATGGCCGC
GAACGCGGGA TGATGAAGGA TATGCCCGCG CTGTTGACCG CCATTCTGGC GGCGCGTGGC
TCGGCGCTGC TGCCGGTAGT ATTTGCGCGG GTGATCAATA ATGGCCGGAT GCTGCGTAAC
TTTGTGCAAA TGTTGCGCAG CGGCGTGACC GGGCGGCGCT CGCTGGGGAC GCGGCCAAAG
AAGCTGGTGC AGCGTTGGTT GCAGAACGCC AGCGAAGAGC GCTTATTGCA GGCATCGGTG
GGCAATATGC CGTCGCTGGC GGATATCGTC AAAATGGTGC ACCCACGGCC GCAGGCGGCG
TGGCAGGAAG CCTTCTTTGC CTGGCTGATT GGTAAGCCGT GCGATAAGGC GCAACTGCCG
GAAAAAACGC GCGCGCTGCT GGCGTTTCGT GAAGGCAATA TGGGCGCGGC CTTACCCGAT
GTGCCGTTTT TACTGCTGAC CAACGCGCCG CTGAGTCGCG AACAATGGGC GCAACTGGCG
CAGCGGATGA GCTGGCAAAC GTTGCGCATG AATTTGAATA CGCTGGCGCG TCATGACGTG
TTTGAGAATG CAACGCTTGC CGCCAGCGTG GCGCAGCGGC TGGCGGACAG GGCGCAGGTG
CGCCAGTCCT GGGTTTATCC TTATCAGCTG CTGTCGGCGT GGAGCAATCT GCAATGCAGC
GTGCCGCAGG TTATTCGCGA GGCTTTAGCG CAGGCGATGG AGTACGCGCT GGAGAACATT
CCGCCGTTTC GCGGCAACGT GGTGGTCTGC CCGGATGTGT CGGGGTCGAT GAAGTCGTCG
ATAACCGGCT ATCGCAAGGG GGCGACCAGT AAGATCCGCT GCGTGGACGT TGCCGGGCTG
ATCGCCGCCG CCGTGCTGCG TAATCATCCG CAGGCCCGCG TGCTGCCGTT TGAATGCGAT
GTGGTCGACG TGCAGCTTGA TGCGCGCCAG TCGGTTATGC ACAACGCGCA AAAGCTGGCG
GCGGTTGGCG GCGGCAGCAC CAACTGCTCC GCGCCGCTGC GTAGGTTGTT GAACGAGCGG
GCGCGGGTGG ATCTGGTGAT TATGGTGTCG GATAACGAAT CGTGGGTTGA TAAGTCGCGC
CATGGCTCAA CGGCCACCAT GGAATGCTGG ATCGAACTGA AAAAGCGCAA CCCGCAGGCG
CGCCTGGTGT GTATCGATCT GCTGCCTTAC GGTACCACCC AGGCGGCGGA ACGAAGCGAT
ATTTTGAACG TCGGCGGCTT CAGCGACGAG GTGTTTACGG TGATAGATAA CTTTGTTAAC
GGTCGCTATG GCAGCGCGCA CTGGCTGGAA GAGATTGAAG CCGTGACGCT GTAA
 
Protein sequence
MANPLLFRSL LRDAPLANAS NQQGAAAFAF TPRHTLAQMV MTGCMNETFY VSGQAQLNDV 
LATAKDLDDL FLAQLAIYGR ERGMMKDMPA LLTAILAARG SALLPVVFAR VINNGRMLRN
FVQMLRSGVT GRRSLGTRPK KLVQRWLQNA SEERLLQASV GNMPSLADIV KMVHPRPQAA
WQEAFFAWLI GKPCDKAQLP EKTRALLAFR EGNMGAALPD VPFLLLTNAP LSREQWAQLA
QRMSWQTLRM NLNTLARHDV FENATLAASV AQRLADRAQV RQSWVYPYQL LSAWSNLQCS
VPQVIREALA QAMEYALENI PPFRGNVVVC PDVSGSMKSS ITGYRKGATS KIRCVDVAGL
IAAAVLRNHP QARVLPFECD VVDVQLDARQ SVMHNAQKLA AVGGGSTNCS APLRRLLNER
ARVDLVIMVS DNESWVDKSR HGSTATMECW IELKKRNPQA RLVCIDLLPY GTTQAAERSD
ILNVGGFSDE VFTVIDNFVN GRYGSAHWLE EIEAVTL