Gene SeD_A3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3885 
SymbolmalT 
ID6871020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3716856 
End bp3719564 
Gene Length2709 bp 
Protein Length902 aa 
Translation table11 
GC content55% 
IMG OID642786847 
Producttranscriptional regulator MalT 
Protein accessionYP_002217475 
Protein GI198242561 
COG category[K] Transcription 
COG ID[COG2909] ATP-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTC CGTCTAAATT AAGTCGTCCG GTTCGTCTCG ACCATACCGT GGTTCGTGAG 
CGGCTGTTGG CTAAACTTTC CGGCGCGAAC AATTTCAGGC TCGCCCTGGT AACCAGTCCT
GCTGGCTATG GGAAAACCAC GCTTGTCTCA CAGTGGGCGG CGGGCAAAAA TGAATTAGGC
TGGTACTCTC TCGACGAAGG CGATAACCAG CAAGAGCGAT TCGCCAGTTA CTTAATTGCC
GCTATCCAAC AGGCCACTGG CGGACACTGC TCTACCAGCG AAGCGATGGC GCAAAAACGT
CAGTACGCCA GCCTGACGTC CCTCTTCGCG CAGCTCTTTA TTGAACTGGC GCAGTGGCAT
CGCCCGCTTT ATCTGGTGAT TGACGACTAC CATTTGATTA CCAATCCGGT GATTCACGAC
GCGATGCGCT TTTTCTTACG GCATCAGCCG GAAAATTTCA CCCTGGTGGT GTTATCGCGT
AATTTGCCGC AACTGGGCAT CGCTAATCTG CGCGTGCGCG ATCAGCTGTT GGAAATCGGC
AGCCAGCAGT TAGCTTTTAA CCATCAGGAA GCAAAGCAAT TTTTTGACCG TCGCCTTTCG
TCGCCCATTG AAGCCGCTGA GAGCAGTCGT ATGTGCGACG ATGTGGCCGG TTGGGCCACT
GCGCTACAGT TGATCGCCCT CTCCGCGCGC CAGAACCATA CCTCTGCGCA TCACTCCGCC
CGCCGTCTTG CCGGGATTAA TGCCAGCCAC CTTTCTGATT ATCTGGTGGA CGAAGTACTG
GATAACGTGG ATGTCAGCAC CCGACATTTT TTACTTAAAA GCGCGATCTT ACGCTCAATG
AATGACGCGT TGATTGTGCG CGTGACCGGC GAAGAAAACG GCCAGATGCG GCTGGAGGAG
ATTGAGCGCC AGGGGTTATT CCTGCAACGC ATGGACGACA CGGGCGAATG GTTCAGCTAT
CACCCGTTGT TTGGTAGCTT TCTGCGCCAG CGTTGCCAGT GGGAACTGGC GGCGGAACTG
CCGGAGATCC ACCGTGCGGC CGCGGAAAGC TGGATGGAAC AAGGTTTTCC CAGCGAAGCT
ATACATCATG CGCTGGCGGC GGGTGACGCG CAAATGCTGC GCGATATCCT GCTTAACCAT
GCGTGGGGGC TGTTTAATCA CAGTGAACTG GCGCTGCTGG AAGAGTCATT AAAAGCGCTG
CCGTGGGAAA GCCTGCTGGA AAATCCGCGG CTGGTGTTGT TACAGGCCTG GCTGATGCAA
AGCCAACACC GCTACAGCGA AGTGAATACG CTGCTGGCGC GCGCCGAGCA AGAGATCAAA
GGGGTCATGG ACGGCACACT GCATGCTGAA TTTAACGCGC TGCGCGCCCA GGTCGCCATC
AACGACGGCA ATCCGGAAGA GGCAGAGCGG CTGGCGAAAC TGGCGCTGGA TGAGCTTCCT
CTCGCCTGGT TTTATAGCCG TATTGTCGCG ACCTCCGTTC ACGGTGAAGT GCTGCACTGT
AAAGGCGATC TCAGCCAGTC TTTATCGCTG ATGCAGCAAA CCGAACAAAT GGCGCGCCAT
CATGACGTCT GGCATTACGC GCTGTGGAGC TTAATTCAAC AAAGCGAAAT TCAGTTCGCC
CAGGGATTCC TGCAGGCCGC ATGGGAAACG CAGGAGAGAG CCTTCCAGTT GATCAAAGAG
CAACAACATC TGGAACAACT GCCGATGCAT GAGTTTCTGG TACGTATCCG CGCGCAATTG
CTGTGGGCGT GGGCGCGCCT TGACGAAGCG GAGGCCTCGG CGCGCAGCGG TATCGCTGTG
CTGTCCACCT TCCAGCCGCA ACAACAGTTG CAGTGCCTGA CGTTACTGGT GCAGTGCTCG
CTGGCGCGCG GCGATCTGGA TAATGCCCGT AGTCAGCTTA ACCGACTGGA AAATTTATTA
GGCAATGGTC GTTATCACTG CGACTGGATC TCTAACGCCG ATAAAGTGCG TGTCATTTAC
TGGCAGTTAA CCGGCGACAA GAAATCCGCC GCCAACTGGT TACGTCATAC GCCCAAACCG
GCGTTTGCCA ATAACCATTT TCTGCAAGGG CAATGGCGGA ATATCGCCCG CGCGCAGATC
CTGCTGGGCG AATTCGAGCC TGCGGAAATC GTGCTGGAAG AGTTAAATGA GAATGCCCGT
AGCCTGCGCT TAATGAGCGA TTTAAACCGC AATCTGCTGT TACTCAATCA GCTTTACTGG
CAATCCGGGC GGAAAAACGA CGCCCAGCGC GTATTGCTTG ATGCCTTACA GCTCGCCAAC
CGCACCGGAT TTATCAGCCA TTTTGTGATT GAAGGCGAAG CCATGGCGCA ACAATTGCGT
CAGCTTATCC AGCTCAATAC GCTGCCGGAG ATGGAGCAGC ATCGCGCGCA GCGCATCCTG
CGAGAGATTA ACCAACATCA CCGGCATAAA TTCGCCCATT TTGACGAAGG CTTCGTCGAG
CGCCTGCTTA ACCATCCGGA TGTCCCGGAG CTTATTCGCA CCAGCCCGCT CACCCAGCGT
GAATGGCAGG TGTTAGGGCT TATCTATTCC GGTTACAGCA ACGAACAGAT TGCCGGCGAA
CTGGCGGTGG CCGCAACCAC CATTAAGACG CATATCCGCA ACCTCTACCA GAAACTCGGC
GTCGCGCACC GTCAGGACGC GGTACAGCAC GCACAACAGT TGCTGAAGAT GATGGGGTAC
GGGGTTTGA
 
Protein sequence
MLIPSKLSRP VRLDHTVVRE RLLAKLSGAN NFRLALVTSP AGYGKTTLVS QWAAGKNELG 
WYSLDEGDNQ QERFASYLIA AIQQATGGHC STSEAMAQKR QYASLTSLFA QLFIELAQWH
RPLYLVIDDY HLITNPVIHD AMRFFLRHQP ENFTLVVLSR NLPQLGIANL RVRDQLLEIG
SQQLAFNHQE AKQFFDRRLS SPIEAAESSR MCDDVAGWAT ALQLIALSAR QNHTSAHHSA
RRLAGINASH LSDYLVDEVL DNVDVSTRHF LLKSAILRSM NDALIVRVTG EENGQMRLEE
IERQGLFLQR MDDTGEWFSY HPLFGSFLRQ RCQWELAAEL PEIHRAAAES WMEQGFPSEA
IHHALAAGDA QMLRDILLNH AWGLFNHSEL ALLEESLKAL PWESLLENPR LVLLQAWLMQ
SQHRYSEVNT LLARAEQEIK GVMDGTLHAE FNALRAQVAI NDGNPEEAER LAKLALDELP
LAWFYSRIVA TSVHGEVLHC KGDLSQSLSL MQQTEQMARH HDVWHYALWS LIQQSEIQFA
QGFLQAAWET QERAFQLIKE QQHLEQLPMH EFLVRIRAQL LWAWARLDEA EASARSGIAV
LSTFQPQQQL QCLTLLVQCS LARGDLDNAR SQLNRLENLL GNGRYHCDWI SNADKVRVIY
WQLTGDKKSA ANWLRHTPKP AFANNHFLQG QWRNIARAQI LLGEFEPAEI VLEELNENAR
SLRLMSDLNR NLLLLNQLYW QSGRKNDAQR VLLDALQLAN RTGFISHFVI EGEAMAQQLR
QLIQLNTLPE MEQHRAQRIL REINQHHRHK FAHFDEGFVE RLLNHPDVPE LIRTSPLTQR
EWQVLGLIYS GYSNEQIAGE LAVAATTIKT HIRNLYQKLG VAHRQDAVQH AQQLLKMMGY
GV