Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3878 |
Symbol | |
ID | 6874739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3706882 |
End bp | 3707808 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642786840 |
Product | hypothetical protein |
Protein accession | YP_002217468 |
Protein GI | 198245712 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCT CAACAACATC CACGCCGCAT GACGCGGTAT TCAAACAGTT TCTATGCCAC CCCGATACTG CACGGGATTT TTTGGAAATT CATCTCCCGA CGACATTACG TCAAATCTGT AATCTGAATA CGTTACGGCT GGAGTCCGGT AGCTTTATTG AAGAGGATTT ACGCCCCCAT TATTCCGATA TTCTTTGGTC GCTGGAAACA AGTGAAGGTG AAGGTTACAT TTACGTGGTT ATTGAACATC AGAGTACGCC GGACGCGCAT ATGGCATTTC GGCTGATGCG TTACGCAATG GCTGCAATGC AACGGCACCT GGAGGCCGGG CATAAGACGT TGCCGTTAGT GGTGCCAATG CTGTTTTATC ACGGAAACCG CAGCCCGTAT CCGTTTTCAT TATGCTGGCT GGATGAATTT GCCGACCCGG TGATGGCGCG TAAGCTATAC GCCACCGCCT TTCCTCTGGT CGATATTACG GTCGTGCCGG ACGACGAGAT TATGCGGCAC CGACGGGTCG CGCTGCTGGA ACTCATACAA AAACACATCC GCCAGCGTGA TCTGATGGGG CTTGTCGAAC AGCTGGTCGC CCTGCTGGTT AAGGGATACG CTAATGACAC CCAGCTTCAA AGTTTGTTTA ATTACATGAT GCACACTGGC GACGCCGCGC GCTTCAATAC GTTTATCCGC CAGGTGGCTA TGCGTATCCC ACAGCATAAG GAGAAGATCA TGACTATCGC AGAAAGATTA CGTCAGGAAG GACATCGTAA CGGGTTACAG AAAGGGCTAC AGCAAGGCAA GCAGGAAGGC CAACGGCTCG CCGCATTGCG CATTGCCCGC TCGATGCTAA ACGATGGTTT CGATCGCGAT ACCGTGCTTA GGGTTACCGG GCTGGCGCCT GCCGATCTGG CGTCTGAAAA CCATTAA
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Protein sequence | MATSTTSTPH DAVFKQFLCH PDTARDFLEI HLPTTLRQIC NLNTLRLESG SFIEEDLRPH YSDILWSLET SEGEGYIYVV IEHQSTPDAH MAFRLMRYAM AAMQRHLEAG HKTLPLVVPM LFYHGNRSPY PFSLCWLDEF ADPVMARKLY ATAFPLVDIT VVPDDEIMRH RRVALLELIQ KHIRQRDLMG LVEQLVALLV KGYANDTQLQ SLFNYMMHTG DAARFNTFIR QVAMRIPQHK EKIMTIAERL RQEGHRNGLQ KGLQQGKQEG QRLAALRIAR SMLNDGFDRD TVLRVTGLAP ADLASENH
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