Gene SeD_A3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3862 
SymbolmrcA 
ID6874493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3686593 
End bp3689145 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content57% 
IMG OID642786824 
Productpeptidoglycan synthetase 
Protein accessionYP_002217452 
Protein GI198244536 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTCG TAAAGTATTT ATTGATCCTT GCAGTATGTT GCATCCTGCT GGGAGCAGGC 
TCGATTTATG GCCTTTATCG CTATATTGAG CCACAGCTAC CTGACGTCGC GACATTGAAA
GATGTGCGTT TGCAAATTCC GATGCAGGTT TACAGCGCGG ATGGCGAACT TATCGCGCAA
TATGGCGAAA AACGCCGTAT TCCCGTTACG CTCGATCAAA TTCCGCCGGA AATGATCAAC
GCCTTTATCG CCACCGAAGA TAGCCGCTTT TATGAGCATC ACGGCATTGA CCCGGTAGGT
ATTTTCCGCG CGGCCAGCGT CGCGCTCTTC TCCGGTCACG CATCGCAGGG AGCAAGTACC
ATTACCCAGC AACTGGCGCG AAACTTCTTC CTTAGCCCCG AACGCACGCT GATGCGCAAG
ATCAAGGAAG CGTTTCTGGC GATTCGTATT GAGCAGTTGC TGAATAAAAA TGAGATCCTC
GAACTCTATC TGAACAAGAT CTATCTCGGC TACCGCGCCT ATGGCGTTGG CGCGGCGGCA
CAGGTCTACT TTGGTAAGAC GGTTGACCAG CTTAGTCTAA GCGAAATGGT GGTTATCGCC
GGGCTACCTA AAGCGCCTTC TACCTTTAAC CCGCTCTACT CGATGGATCG GGCGGTGGCG
CGCCGTAACG TAGTGCTTTC GCGAATGTTA AGCGAGGGAT ATATCACTCA GGCGCAGTAC
GATCAGGCAC GTAGCGAACC TATCGACGCA AATTATCACG CGCCGGAAAT CGCCTTCTCC
GCGCCTTATC TGTCGGAAAT GGTGCGCCAG GAAATGTATA ACCGTTATGG CGAAAGCGCC
TACGAAGATG GTTATCGTAT TTACACGACC ATCACCCGCA AAGTGCAGCA GGCCGCGCAA
CAGGCGGTGC GTAATAACGT GCTGGACTAT GACATGCGCC ACGGTTATCG CGGCCCGGCG
AATGTGCTAT GGAAAGTGGG CGAAACGGCG TGGGACAGTA AAAAAATTAC CGATACGTTG
AAAGCGTTAC CGACCTACGG ACCGCTGCTT CCCGCCGTGG TCACCAGCGC TAATCCGCAA
GAGGCGACCG CTGCGCTTGC CGACGGTACG TCCGTTTCGC TACATATGGA AGGAATGCGT
TGGGCGCGGC CTTACCGCTC GGATACACAG CAGGGGCCGA CGCCGCGTAA AGTTACCGAT
GTCGTCCAGA CAGGTCAGCA AATCTGGGTT CGTCAGGTGG ATAACGACTG GTGGCTGGCG
CAGGTACCGG AAGTGAACTC CGCGCTGGTT TCGCTTAACC CGCAAACAGG CGCGGTAATG
GCGCTGGTCG GCGGTTTCGA TTTTAATCAG AGTAAATTTA ACCGCGCGAC GCAAGCTTTG
CGTCAGGTGG GGTCGAACAT CAAACCGTTC CTCTACACCG CCGCAATGGA TAAAGGGCTG
ACGCTCGCCA GTATGCTCAA CGATGTGCCG ATTTCCCGCT GGGACGCCGG GGCAGGTTCA
GACTGGCGTC CGAAAAACTC CCCGCCGCAG TACGCCGGAC CGATTCGTTT ACGCCAGGGG
CTGGGGCAGT CGAAAAACGT GGTGATGGTA CGCGCCATGC GCGCCATGGG CGTCGACTAT
GCGGCGGAGT ATCTGCAACG CTTCGGCTTC CCGGCGCAGA ATATCGTGCA TACCGAATCG
CTGGCGCTGG GCTCCGCCTC CTTCACGCCG ATGCAGGTTG CGCGCGGTTA TGCGGTGATG
GCGAACGGCG GTTTCCTGAT CGACCCGTAT TTCATCAGCA AGATTGAGAA CGATCAGGGC
GGCGTGATCT TCGAAGCGAA ACCGAAAATC GCCTGCCCGG AGTGCGATAT CCCGGTCATT
TACGGCAATA CGCAGAAATC TGACGTGCTG GAAAACACCA ATGTGGAAGA GGTCGCGGTT
TCGCAAGAGC AGCAAAACAG CGCCGTACCG ATGCCTGAGC TGGAACAGGC AAACCAGGCG
CTGGTCGCGC AAAACGGCAC GCAGGAATAC GCGCCGCATG TGATCAATAC GCCGCTGGCG
TTTCTGATCA AAAGCGCGCT GAACACCAAT ATCTTTGGCG AACCCGGCTG GATGGGTACC
GGCTGGCGTG CGGCGCGCGA CCTTAAACGT CGCGATATCG GCGGCAAAAC CGGTACGACC
AACAGCTCGA AAGACGCATG GTTCTCCGGC TATGGTCCTG GCGTCGTCAC TTCCGTATGG
ATCGGCTTTG ACGATCACCG CCGTGATTTA GGCCGCACCA CCGCTTCCGG CGCGATCAAA
GATCAAATCT CCGGCTATGA GGGCGGCGCG AAGAGCGCGC AACCTGCATG GGACGCCTAT
ATGAAAGCCG TGCTGGAAGG CGTGCCGGAA CAGCCGCTAA CGCCGCCGCC GGGCATCGTC
ACGGTGAATA TCGACCGCAG TACCGGACAA CTGGCGAGCG GCGGTAACAG CCGTGAAGAG
TATTTCATCG AAGGCACGCA GCCGACACAA CAGGCGGTAC ACGAGGTGGG AACCACCATT
ATTGATAATG GTGAAACACA CGAACTGTTC TGA
 
Protein sequence
MKFVKYLLIL AVCCILLGAG SIYGLYRYIE PQLPDVATLK DVRLQIPMQV YSADGELIAQ 
YGEKRRIPVT LDQIPPEMIN AFIATEDSRF YEHHGIDPVG IFRAASVALF SGHASQGAST
ITQQLARNFF LSPERTLMRK IKEAFLAIRI EQLLNKNEIL ELYLNKIYLG YRAYGVGAAA
QVYFGKTVDQ LSLSEMVVIA GLPKAPSTFN PLYSMDRAVA RRNVVLSRML SEGYITQAQY
DQARSEPIDA NYHAPEIAFS APYLSEMVRQ EMYNRYGESA YEDGYRIYTT ITRKVQQAAQ
QAVRNNVLDY DMRHGYRGPA NVLWKVGETA WDSKKITDTL KALPTYGPLL PAVVTSANPQ
EATAALADGT SVSLHMEGMR WARPYRSDTQ QGPTPRKVTD VVQTGQQIWV RQVDNDWWLA
QVPEVNSALV SLNPQTGAVM ALVGGFDFNQ SKFNRATQAL RQVGSNIKPF LYTAAMDKGL
TLASMLNDVP ISRWDAGAGS DWRPKNSPPQ YAGPIRLRQG LGQSKNVVMV RAMRAMGVDY
AAEYLQRFGF PAQNIVHTES LALGSASFTP MQVARGYAVM ANGGFLIDPY FISKIENDQG
GVIFEAKPKI ACPECDIPVI YGNTQKSDVL ENTNVEEVAV SQEQQNSAVP MPELEQANQA
LVAQNGTQEY APHVINTPLA FLIKSALNTN IFGEPGWMGT GWRAARDLKR RDIGGKTGTT
NSSKDAWFSG YGPGVVTSVW IGFDDHRRDL GRTTASGAIK DQISGYEGGA KSAQPAWDAY
MKAVLEGVPE QPLTPPPGIV TVNIDRSTGQ LASGGNSREE YFIEGTQPTQ QAVHEVGTTI
IDNGETHELF