Gene SeD_A3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3853 
Symbol 
ID6872334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3679646 
End bp3680923 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content57% 
IMG OID642786818 
Producthypothetical protein 
Protein accessionYP_002217446 
Protein GI198243521 
COG category[S] Function unknown 
COG ID[COG3266] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.213422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAT TCAAACCAGA AGACGAGCTG AAACCCGATC CCAGCGATCG TCGTACTGGT 
CGTTCTCGTC AATCTTCAGA ACGCGATAAT GAGCCGCAGA TCAACTTTGA TGACGTTGAT 
CTGGATGCCG ACGATCGCCG TCCGACGCGT ACGCGTAAAG CGCGTAGTGA AGAACCTGAA 
GTTGAAGAAG AGTACGAATC CGATGAAGAC GATACGGTGG ACGAAGAGCG TGTTGAACGC 
CGTCCACGTA AGCGTAAAAA AGCGGCCCAT AAGCCAGCCT CTCGTCAATA CATGATGATG 
GGCGTTGGCG TACTGGTGCT GCTGCTGTTG ATTATCGGTA TCGGCTCCGC GCTGAAAGCC 
CCCTCAACGT CTTCCAGCGA GCCGTCGGCC TCTGGCGAAA AGAGTATCGA TCTTTCCGGT 
AACGCCGCCG ATCAGGCGAA TGCGACCCAG CCTGCGCCGG GCGCCACCTC CGCAGAACAA 
ACCGCGGGCA ATACGTCGCA GGATATTTCG TTGCCGCCGA TTTCTTCAAC GCCGACGCAG 
GGACAGTCAC CTGTGGTCGC TGACGGTCAG CAGCGCGTGG AAGTACAGGG CGATCTGAAT 
AATGCGCTGA CGCAGAATCC AGAGCAGATG AACAATGTTG CGGTGAACTC TACGTTGCCG 
ACAGAGCCTG CAACCGTCGC GCCAGTTCGC AATGGCAGCA CGACGCGTCA GGCGGCGGTT 
AGCGAACCTA CCGAGCGTCA TACCACGCGT CCGGAACATA AACAGGCCGT CATTGAACCT 
AAGAAACCGC AGACCACGGC GAAAACCACG ACTGCGGAAC CGAAGAAACC GGTCGCGCCA 
GTGAAACGTA CGGAACCGGC AGCGCCAGCC GCGACGCCGA AAGCGACCAC CACGACGGCT 
GCGCCGACAG CGACGGCAAG CGCTGCGCCG GTACAAACCG CGAAGCCAGC GCAAGCCTCG 
ACGACGCCTG TCGCAGGCGG CGGGAAAAGC GCCGGCAACG TTGGCGCGTT AAAGAGCGCG 
CCATCCAGCC ACTACACATT GCAGCTCAGT AGTTCTTCAA ATTACGACAA CCTGAACGGT 
TGGGCGAAGA AAGAGAACCT GAAAAATTAT GTGGTATACG AGACGACGCG TAATGGACAA 
CCGTGGTATG TGCTGGTAAC GGGGATGTAT GCTTCGAAAG AAGATGCTAA ACGTGCGGTG 
TCCACCTTAC CTGCCGATGT GCAGGCGAAA AACCCGTGGG CAAAACCGTT GCATCAGGTT 
CAGGCCGATC TGAAATAA
 
Protein sequence
MDEFKPEDEL KPDPSDRRTG RSRQSSERDN EPQINFDDVD LDADDRRPTR TRKARSEEPE 
VEEEYESDED DTVDEERVER RPRKRKKAAH KPASRQYMMM GVGVLVLLLL IIGIGSALKA 
PSTSSSEPSA SGEKSIDLSG NAADQANATQ PAPGATSAEQ TAGNTSQDIS LPPISSTPTQ 
GQSPVVADGQ QRVEVQGDLN NALTQNPEQM NNVAVNSTLP TEPATVAPVR NGSTTRQAAV 
SEPTERHTTR PEHKQAVIEP KKPQTTAKTT TAEPKKPVAP VKRTEPAAPA ATPKATTTTA 
APTATASAAP VQTAKPAQAS TTPVAGGGKS AGNVGALKSA PSSHYTLQLS SSSNYDNLNG 
WAKKENLKNY VVYETTRNGQ PWYVLVTGMY ASKEDAKRAV STLPADVQAK NPWAKPLHQV 
QADLK