Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3845 |
Symbol | nirC |
ID | 6873428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3667375 |
End bp | 3668184 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642786810 |
Product | nitrite transporter NirC |
Protein accession | YP_002217438 |
Protein GI | 198244441 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2116] Formate/nitrite family of transporters |
TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACAG ACACTATCAA TAAGTGTGCG GCTAACGCTG CGCGCATCGC ACGCCTGTCG GCGAATAATC CGCTCGGCTT CTGGGTCAGT TCGGCAATGG CCGGGGCTTA TGTCGGTCTC GGCATCATTC TTATTTTCAC CCTCGGCAAT CTGCTCGACC CGTCCGTGCG TCCTTTGGTG ATGGGAGCGA CCTTCGGTAT CGCCTTAACG CTGGTCATCA TCGCAGGTTC CGAACTGTTT ACCGGCCACA CCATGTTCCT GACGCTGGGC GTCAAAGCAG GCACCATCAG CCACGGTCAA ATGTGGGCTA TCCTGCCGCA AACCTGGCTC GGCAACCTGG TCGGTTCCGT GTTTGTCGCC CTGCTTTACA GCTGGGGCGG CGGCAGTTTG TTGCCGGTCG ATACCAGTAT CGTTCACTCA GTCGCGCTGG CGAAAACCAC CGCGCCCGCC ACGGTACTGT TCTTCAAAGG CGCGCTGTGT AACTGGCTGG TTTGTCTGGC AATCTGGATG GCGATTCGCA CCGAAGGCAC GGCAAAATTT CTTGCTATCT GGTGGTGTCT GCTGGCGTTT ATCGCTTCCG GCTACGAGCA CTCCGTCGCG AATATGACGC TGTTTGCCCT CTCCTGGTTT GGTCATCACA GCGACGCCTA TACCCTGTCC GGAATCGGAC ACAATCTGTT ATGGGTCACT CTGGGCAATA CTTTGTCCGG CGTCGTGTTC ATGGGATTGG GTTATTGGTA TGCTACGCCG AAATCGGAGC GTCCTGTTCC GCAAAAAACC AACCAAATTA AGGTTACAGC CAACCATTAA
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Protein sequence | MFTDTINKCA ANAARIARLS ANNPLGFWVS SAMAGAYVGL GIILIFTLGN LLDPSVRPLV MGATFGIALT LVIIAGSELF TGHTMFLTLG VKAGTISHGQ MWAILPQTWL GNLVGSVFVA LLYSWGGGSL LPVDTSIVHS VALAKTTAPA TVLFFKGALC NWLVCLAIWM AIRTEGTAKF LAIWWCLLAF IASGYEHSVA NMTLFALSWF GHHSDAYTLS GIGHNLLWVT LGNTLSGVVF MGLGYWYATP KSERPVPQKT NQIKVTANH
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