Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3823 |
Symbol | slyD |
ID | 6874331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3647114 |
End bp | 3647704 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642786789 |
Product | FKBP-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_002217417 |
Protein GI | 198244338 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0860758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.819036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAG CAAAAGACCT GGTGGTCAGC CTGGCCTATC AGGTACGTAC AGAAGACGGT GTGTTGGTTG ATGAGTCTCC GGTGAGTGCG CCGCTGGATT ACCTGCACGG CCACGGCTCT CTGATCTCTG GCCTGGAAAC GGCGCTGGAA GGCCATGAAG TTGGCGACAA ATTTGATGTC GCTGTTGGTG CGAACGACGC TTACGGCCAG TATGACGAAA ATCTGGTGCA GCGTGTGCCT AAAGACGTCT TTATGGGCGT TGATGAACTG CAGGTAGGGA TGCGTTTCCT GGCGGAAACC GACCAGGGCC CGGTACCGGT AGAGATTACC GAAGTGGAAG ACGATCACGT TGTGGTTGAT GGTAACCACA TGCTGGCGGG CCAGAATCTG AAATTTAACG TAGAAGTTGT TGCGATTCGT GAAGCGACTG AAGAAGAACT GGCTCACGGT CATGTTCACG GCGCGCACGA TCACCACCAC GATCACGGTG AAGACGGTTG CTGTGGCGGT CATGGTCATG ACCATGGTCA CGAGCACGGC GGCGAAGGCT GCTGCGGCGG TGGTGGTAAA GGCGGTTGCG GTTGCCATTA A
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Protein sequence | MKVAKDLVVS LAYQVRTEDG VLVDESPVSA PLDYLHGHGS LISGLETALE GHEVGDKFDV AVGANDAYGQ YDENLVQRVP KDVFMGVDEL QVGMRFLAET DQGPVPVEIT EVEDDHVVVD GNHMLAGQNL KFNVEVVAIR EATEEELAHG HVHGAHDHHH DHGEDGCCGG HGHDHGHEHG GEGCCGGGGK GGCGCH
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