Gene SeD_A3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3795 
SymbolrplE 
ID6874350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3630959 
End bp3631498 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content49% 
IMG OID642786762 
Product50S ribosomal protein L5 
Protein accessionYP_002217390 
Protein GI198244359 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0138381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAC TGCATGATTA CTACAAAGAC GAAGTAGTTA ACAAACTCAT GACTGAGTTT 
AACTACAATT CTGTCATGCA AGTCCCTCGG GTCGAGAAGA TCACCCTGAA CATGGGTGTT 
GGTGAAGCGA TCGCTGACAA GAAACTGCTG GATAACGCAG CAGCAGACCT GACAGCAATC 
TCCGGTCAAA AACCGTTGAT CACCAAAGCA CGCAAATCTG TTGCAGGCTT CAAAATCCGT 
CAGGGCTATC CGATCGGCTG TAAAGTAACT CTGCGTGGCG AACGCATGTG GGAGTTCTTT 
GAGCGCCTGA TCACTATTGC TGTTCCTCGT ATCCGTGACT TCCGTGGCTT GTCCGCTAAG 
TCATTCGACG GTCGTGGTAA CTACAGCATG GGTGTCCGTG AGCAGATCAT CTTCCCAGAA 
ATCGACTACG ATAAAGTCGA CCGCGTTCGT GGTTTGGATA TTACCATTAC CACTACTGCG 
AAATCTGACG AAGAAGGCCG TGCTCTGCTG GCTGCCTTTG ACTTCCCGTT CCGCAAGTAA
 
Protein sequence
MAKLHDYYKD EVVNKLMTEF NYNSVMQVPR VEKITLNMGV GEAIADKKLL DNAAADLTAI 
SGQKPLITKA RKSVAGFKIR QGYPIGCKVT LRGERMWEFF ERLITIAVPR IRDFRGLSAK 
SFDGRGNYSM GVREQIIFPE IDYDKVDRVR GLDITITTTA KSDEEGRALL AAFDFPFRK