Gene SeD_A3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3784 
SymbolrpsM 
ID6875665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3626175 
End bp3626531 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID642786753 
Product30S ribosomal protein S13 
Protein accessionYP_002217381 
Protein GI198245668 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0191543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGTA TAGCAGGCAT TAACATTCCT GATCAGAAAC ACGCCGTGAT CGCGTTAACT 
TCGATCTACG GTGTCGGCAA GACCCGTTCT AAAGCCATCT TGGCTGCAGC GGGTATCGCT
GAAAATGTTA AGATCAGTGA GCTGTCTGAA GAACAAATCG ACACGCTGCG TGACGAAGTT
GCCAAATTTG TCGTTGAAGG TGATCTGCGC CGTGAAATCA GCATGAGCAT CAAGCGCCTG
ATGGATCTTG GTTGCTATCG CGGTTTGCGT CATCGTCGTG GTCTCCCGGT TCGCGGTCAG
CGTACCAAGA CCAACGCTCG TACCCGTAAG GGTCCGCGCA AACCGATCAA GAAATAA
 
Protein sequence
MARIAGINIP DQKHAVIALT SIYGVGKTRS KAILAAAGIA ENVKISELSE EQIDTLRDEV 
AKFVVEGDLR REISMSIKRL MDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIKK