Gene SeD_A3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3747 
Symbol 
ID6872387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3597467 
End bp3598351 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content45% 
IMG OID642786722 
Productputative methyltransferase 
Protein accessionYP_002217356 
Protein GI198244548 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00189132 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.187537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG AATGTGAACC TCAGTACTTT GGCGATGAAT CGAAGAAGAT TATTCACGGT 
GACGCGCTAA CAGAACTTAA AAAACTGCCT TCTGAAAGCA TTGACTTAAT TTTTGCCGAT 
CCGCCTTACA ATATCGGAAA AGATTTCGAC GGTATGGTGG AGTCCTGGGA CGAAGCGTCT 
TTTCTGGCCT GGCTGTATGA ATGCATTGAT GAGTGCCACC GCGTACTGAA GAAACACGGC 
ACCATGTACA TCATGAATAG CACAGAAAAT ATGCCGTATA TCGATCTCAA ATGCCGAACG 
CTTTTTACCA TCAAAAGCCG TATCGTCTGG TCCTATGATA GTTCCGGGGT GCAGGCGAAA 
AAATACTTTG GTTCTATGTA TGAACCGATC CTGATGATGG TAAAAAACCC GAAAAGCTAT 
ACCTTTAACC GTGATGCGAT TCTGGTCGAA ACCACTACGG GCGCTAAGCG CGCGCTAATC 
GATTATCGAA AAAACCCGCC CCAACCATAC AATCAGAAAA AAGTGCCGGG CAACGTCTGG 
TCATTTCCTC GCGTACGTTA TCTGATGGAT GAATATGAAA ACCATCCTAC GCAAAAGCCC 
AGCGCGCTGT TAAAACGGAT CATACTGGCC TCTTCTAACC CGAGCGATAC CGTATTGGAC 
CCTTTCGCGG GCAGTTTCAC CACAGGCGCT GTCGCAGCGG CGTCAGGTCG TAAGTTTATC 
GGTATTGAAC TCAATAATGA GTACGTAAAA ATGGGGCTCA GAAGATTGAG CGTCACTTCG 
CATTATTCAG AAAATGAACT TGCAAAAGTC AAAAAGAGAA AAACACAAAA CCTGTCCAAA 
AAGCAGCGAA ATGTCGGGAT AAACGCGCTA TCTTCAGAGA AGTAA
 
Protein sequence
MKAECEPQYF GDESKKIIHG DALTELKKLP SESIDLIFAD PPYNIGKDFD GMVESWDEAS 
FLAWLYECID ECHRVLKKHG TMYIMNSTEN MPYIDLKCRT LFTIKSRIVW SYDSSGVQAK 
KYFGSMYEPI LMMVKNPKSY TFNRDAILVE TTTGAKRALI DYRKNPPQPY NQKKVPGNVW 
SFPRVRYLMD EYENHPTQKP SALLKRIILA SSNPSDTVLD PFAGSFTTGA VAAASGRKFI 
GIELNNEYVK MGLRRLSVTS HYSENELAKV KKRKTQNLSK KQRNVGINAL SSEK