Gene SeD_A3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3746 
Symbolfis 
ID6871547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3597085 
End bp3597381 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content46% 
IMG OID642786721 
ProductDNA-binding protein Fis 
Protein accessionYP_002217355 
Protein GI198243092 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000657586 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0919555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC AACGCGTAAA TTCTGACGTA CTGACCGTTT CTACCGTTAA CTCTCAGGAT 
CAGGTAACCC AAAAACCCCT GCGTGACTCG GTTAAACAGG CACTGAAGAA CTATTTTGCT
CAACTGAATG GTCAGGACGT TAATGACCTG TATGAGCTGG TACTGGCTGA AGTAGAACAG
CCCCTGTTGG ACATGGTGAT GCAATACACC CGTGGTAACC AGACCCGTGC TGCTCTGATG
ATGGGCATCA ACCGTGGTAC GCTGCGTAAA AAATTAAAAA AATACGGCAT GAACTAA
 
Protein sequence
MFEQRVNSDV LTVSTVNSQD QVTQKPLRDS VKQALKNYFA QLNGQDVNDL YELVLAEVEQ 
PLLDMVMQYT RGNQTRAALM MGINRGTLRK KLKKYGMN