| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3740 |
|---|
| Symbol | accC |
|---|
| ID | 6875599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 3591399 |
|---|
| End bp | 3592748 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642786715 |
|---|
| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
|---|
| Protein accession | YP_002217349 |
|---|
| Protein GI | 198243570 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.133198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGATA AAATTGTCAT CGCCAACCGC GGCGAGATCG CACTACGTAT TCTTCGAGCC
TGTAAAGAAC TCGGCATCAA GACCGTCGCT GTGCACTCAA GCGCGGATCG CGATTTAAAA
CACGTATTGC TGGCGGATGA GACGGTCTGT ATTGGCCCGG CACCGTCCGT AAAAAGTTAT
CTGAACATCC CGGCTATCAT TAGCGCCGCT GAAATCACCG GCGCGGTGGC AATCCACCCG
GGTTACGGCT TCCTTTCTGA GAACGCCAAT TTTGCCGAGC AGGTTGAACG CTCCGGCTTT
ATCTTTATCG GCCCGAAAGC GGACACCATC CGCCTGATGG GCGATAAAGT GTCCGCGATT
ACCGCGATGA AAAAAGCGGG CGTGCCGACC GTACCAGGAT CTGACGGCCC GCTGGGCGAC
GATATGAATG CGAACCGCGC TCATGCCAAA CGTATTGGCT ATCCGGTGAT CATCAAAGCG
TCCGGCGGCG GCGGCGGCCG CGGTATGCGC GTGGTTCGTA GCGATGCTGA ACTGGCGCAG
TCCATCTCCA TGACCAAAGC GGAAGCGAAA GCGGCTTTCA GCAACGACAT GGTATACATG
GAAAAATACC TGGAAAATCC ACGCCACATC GAAATTCAGG TGCTGGCGGA CGGCCAGGGC
AACGCTATCT ATCTGGCGGA ACGCGACTGT TCCATGCAGC GTCGCCACCA GAAAGTGGTT
GAAGAAGCCC CGGCGCCAGG CATTACGCCG GAACTGCGTC GCTATATCGG CGAACGCTGC
GCGAAAGCGT GCGTAGACAT CGGCTATCGC GGCGCAGGGA CGTTCGAATT CCTGTTCGAA
AACGGCGAGT TCTATTTCAT CGAAATGAAC ACCCGTATTC AGGTTGAACA CCCGGTGACT
GAAATGATTA CCGGCGTCGA TTTGATCAAA GAGCAGTTGC GCATCGCGGC GGGTCAGCCG
CTGTCGATCA CACAGGACGA AGTTGTCGTT CGAGGCCATG CGGTAGAATG CCGTATCAAT
GCCGAAGATC CGAACACCTT CCTGCCAAGC CCAGGCAAAA TCACGCGCTT CCATGCGCCT
GGCGGCTTTG GCGTTCGCTG GGAATCTCAT ATCTACGCGG GCTACACGGT TCCGCCGTAC
TATGATTCCA TGATCGGCAA ACTCATCTGC TACGGTGAAA ACCGCGACGT GGCGATTGCC
CGTATGAAAA ATGCCCTGCA GGAACTGATT ATCGATGGTA TCAAAACCAA TATCGATCTG
CAGACCCGCA TCATGAATGA CGAGCACTTC CAGCACGGTG GAACCAACAT CCACTATCTG
GAGAAAAAAC TCGGTCTTCA GGAAAAGTAA
|
|---|
| Protein sequence | MLDKIVIANR GEIALRILRA CKELGIKTVA VHSSADRDLK HVLLADETVC IGPAPSVKSY
LNIPAIISAA EITGAVAIHP GYGFLSENAN FAEQVERSGF IFIGPKADTI RLMGDKVSAI
TAMKKAGVPT VPGSDGPLGD DMNANRAHAK RIGYPVIIKA SGGGGGRGMR VVRSDAELAQ
SISMTKAEAK AAFSNDMVYM EKYLENPRHI EIQVLADGQG NAIYLAERDC SMQRRHQKVV
EEAPAPGITP ELRRYIGERC AKACVDIGYR GAGTFEFLFE NGEFYFIEMN TRIQVEHPVT
EMITGVDLIK EQLRIAAGQP LSITQDEVVV RGHAVECRIN AEDPNTFLPS PGKITRFHAP
GGFGVRWESH IYAGYTVPPY YDSMIGKLIC YGENRDVAIA RMKNALQELI IDGIKTNIDL
QTRIMNDEHF QHGGTNIHYL EKKLGLQEK
|
|---|
| |