Gene SeD_A3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3729 
Symbol 
ID6871698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3576759 
End bp3580559 
Gene Length3801 bp 
Protein Length1266 aa 
Translation table11 
GC content56% 
IMG OID642786704 
Producthypothetical protein 
Protein accessionYP_002217338 
Protein GI198243110 
COG category[S] Function unknown 
COG ID[COG3164] Predicted membrane protein 
TIGRFAM ID[TIGR02099] conserved hypothetical protein TIGR02099 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.424475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.178844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGAT TGCCGGGGAT TTTATTGCTC ACTGGAGCCG CGCTCATCGT CATTGCAGCG 
CTGCTGGTTA GCGGGCTGCG CCTGGCGTTG CCTCATCTTG ACGCCTGGCG TCCAGCTATC
CTGAATAAAA TTGAGTCCGT GACCGGCGTG CCGGTGGCCG CCAGCCAACT CTCCGCAAGC
TGGCAAAATT TTGGCCCTAC GCTGGAAGCG CATAATATTC ATGCCGCCCT GAAAGATGGC
GGCGAGCTGT CGATAAAACG CGTTACGCTG GCGCTGGACG TCTGGCAAAG CCTGTTGCAT
ATGCGCTGGC AGTTTCGCGA CCTGACCTTC TGGCAACTCA ATTTCCGCAC CAACACGCCT
CTTCAAAGCA GCGACGGCAA AGGCATCGAA ACCAGCCGTT TAAGCGATCT TTTCCTGCGT
CAGTTCGATC ATTTCGATCT GCGCGATAGC CAAATCAGTT TTCTGACGCT TTCCGGACAA
CGCGCGGAGC TGGCGATCCC ACAGCTTACC TGGCTAAACG GCAAAGAGCG GCACCGCGCC
GAAGGCGAGG TCAGCCTCTC CAGCCTGACC GGGCAGCACG GCGTGATGCA GGTGCGGATG
GATTTACGCG ATGACGACGG TTTGCTGAAT AACGGCAGAG TCTGGTTACA GGCCGACGAT
ATTGACGTCA AGCCGTGGCT GGGCAAATGG ATGCAGGATA ATGTGGCGCT CCAGACGGCG
CGTTTCAGTC TGGAAGGCTG GATGACGCTC AGTAAAGGCG AAATCGCCGG AGGAGACGTC
TGGCTGAAAC AGGGCGGCGC AAGCTGGCTG GGCGATAACA CGACGCACAC GCTGTCTGTC
GATAACCTGA CGGCGAAGAT TAGCCGCGAG CAGCCGGGCT GGCAGTTTTA TATTCCGGAC
ACACGGATTA CGCTTGATGG TAAACCCTGG CCGAGCGGAG CCTTAACCGT GGCCTGGCTC
CCGCAGCAGG ACGTCGGCGG CGAGAATCAC ACACGTAGCG ATGAGCTACG CATTCGCGCC
AGTAATCTTG AACTGGCGGG GCTGGAAGCA TTACGTCCGC TGGCGGCTAA ACTGTCGCCT
GTGCTGGGCG AAATATGGCA GGCTACGCAG CCGAGCGGAA AGATCGCCAC ACTGGCGCTG
GATATTCCGC TACAGGCGAC CGAAAAAACG CGTTTTCAGG CATCGTGGGA AAATCTTGCC
TGGAAACAGT GGAAGCTGTT GCCCGGCGCG GAACATTTTT CCGGTACGCT GGCGGGAAGC
GTAGAAGACG GGCAGATGAA GGTTGCGATG CAGCAAGCTA AAATGCCCTA TGAAACCGTT
TTTCGCGCGC CGCTGGAAAT TGAAAACGGC GTCGCGACGC TTAGCTGGTT GAAGAATGAG
AACGGCTTTC AGCTTGATGG CCGCGACATT GACGTCAAAG CAAAGGCGGT ACATGCGCGC
GGCGGGTTCC GCTATCTGCA ACCGACGGGC GACGAACCGT GGCTGGGTAT TCTGGCCGGA
ATCAGTACCG ATGATGGATC TCAGGCGTGG CGCTATTTTC CGGAAAACCT GATGGGCAAA
GCGCTGGTCG ATTACCTTAG CGGCGCGATT CAGGGCGGCG AGGCGGATAA CGCCACGTTG
GTTTACGGTG GTAACCCGCA CCTCTTTCCC TATAAGCATA ACGAAGGTCA GTTTGAAGTG
CTGGTGCCGC TACGCAATGC GACGTTTGCC TTTCAACCCG ACTGGCCGGC GCTAAAAAAT
CTCAACATTG AACTGGATTT CCTGAACGAC GGTCTGTGGA TGCGTTCGGA TAGCGTCGAT
TTGGGCGGGG TGAAGGCCAG CAAACTCGCG GCGACGATTC CGGATTATTC CAAAGAGAAA
CTGCTCATTG ATGCCGATAT TAACGGGCCG GGAAAAGCCG TTGGGCCTTA TTTTGACGAG
ACGCCGCTAA AAGACTCGCT TGGCTCGACG CTGGCGGAGC TCCAGTTAGA TGGCGATGTG
AATGCTCGCT TACATCTTGA TATTCCGCTG GACGGAGAAC AGGTTACCGC CGAGGGCGAT
GTCTCGTTGC GTAATAACAG TCTGTTTATT AAGCCGCTAA ACAGCACGCT CAAAAATCTG
AACGGTAAAT TCAGCTTTGT GAATGGCGCG CTAAAAAGCG GGCCGCTGAC GGCAAACTGG
TTTAATCAGC CGCTTAACCT GGATTTCAGT ACGACGGAAG GGGCAAAAGC CTATCAGGTC
GCCGTCAACC TGAACGGTAA CTGGCAACCA ACGCGTATGG GCGTCTTACC GCCGCAACTG
AATGACGCCC TGAGCGGCAG CGTGACGTGG AATGGTAAAG TCGGCATCGA TCTTCCGTAT
CACGCTGACA CCACTTATCA CATCGAGCTG AACGGCGATC TGAGAAATGT GAGCAGTCAC
TTACCTTCTC CGCTAAATAA ACCCGCAGGC GAAGCCATTC CGGTGAACAT TCAGGCTGAC
GGCAACCTGA AAAGTTTTGC GCTAACGGGG AGCGCAGGGA GTAAAAATCA CTTTAACAGC
CGCTGGTTAT TAAATCAGAA GCTGACGTTG GATCGGGCTA TCTGGACGAC GGACAGCCGG
ACGATTCCGC CATTACCTGC TCAACAAGGC GTTGAACTCA ATCTGCCGGC GCTGGATGGC
GCACAATGGC TGGCGTTATT CCAGAAAGGC GCGGCGGATA ACGTGAGCAG TTCAGCCGAG
TTTCCTCAAC GCGTCACGTT GCGTACTCCC GCGCTATCGC TGGGTGGCCA GCAGTGGAAC
AATTTGAGCG TCGTTTCAGC CCCCTCGCTG AACGGAACAA AAATTGAAGC GCAGGGCCGT
GAGGTGAACG CCACGCTGCT CATGCGCAAC CATGCGCCGT GGCTGGCGAA TATTAAGTAC
CTGTACTACA ACCCTGGCGT CGCAAAAACG CACGCCTCGT CACCAACGCC GACATCGCCG
TTGGCTTCGG CGAACACGAT TAGCTTCCGC GGCTGGCCGG ACTTACAGCT TCGCTGCGAA
GAGTGCTGGC TGTGGGGGCA AAAATATGGG CGTATTGATG GCGATTTCGC CATCAAAGGC
AATACGCTGA CTCTGGCGAA TGGCCTGATC GATACCGGAT TCGCCCGTTT GAAAGCGAAC
GGCGAGTGGG TGAATGCGCC GGGTAATGAA CGAACCTCGC TGAAAGGTAG TCTGCATGGT
AGTAACCTCG ACACGGCTGC CGGGTTCTTC GGTATCTCGA CGCCAATCCA GAACGCGTCT
TTTAACGTAG ATTACGATCT GCACTGGCGA AACCCGCCCT GGCAACCTGA GGAAGCCACG
CTCAACGGGA TTTTACGTAC GCGTCTGGGT AAAGGCGAGT TTACTGATCT CAGTAGCGGT
CATGCCGGAC AGTTACTGCG GCTGCTCAGT TTTGATGCGT TGCTGCGTAA GCTGCGGTTT
GACTTCAGAG ATACCTTTAG CGAGGGCTTC TATTTCGACT CTATTCATAG TACCGCGTGG
ATTAAAGATG GCGTCCTGCA TACTGACGAT ACGCTGGTGG ATGGGCTGGA AGCGGATATT
GCAATGAAAG GTTCTGTTGA TCTGGTGCGT CGTCGTCTTG ATATGGAGGC CGTTGTCGCG
CCGGAAATTT CCGCCACAGT GGGCGTCGCC GCCGCGTTTG CCGTTAACCC GATTGTCGGC
GCGGCGGTAT TTGCCGCCAG TAAAGTGTTG GGGCCGCTAT GGAGCAAGGT CTCCATTTTG
CGATATCGCA TTACCGGTCC GGTCGATGCG CCGCAGATCA ACGAAGTTCT GCGCCAACCG
ATAAAAGAAA GCCAGCAATG A
 
Protein sequence
MRRLPGILLL TGAALIVIAA LLVSGLRLAL PHLDAWRPAI LNKIESVTGV PVAASQLSAS 
WQNFGPTLEA HNIHAALKDG GELSIKRVTL ALDVWQSLLH MRWQFRDLTF WQLNFRTNTP
LQSSDGKGIE TSRLSDLFLR QFDHFDLRDS QISFLTLSGQ RAELAIPQLT WLNGKERHRA
EGEVSLSSLT GQHGVMQVRM DLRDDDGLLN NGRVWLQADD IDVKPWLGKW MQDNVALQTA
RFSLEGWMTL SKGEIAGGDV WLKQGGASWL GDNTTHTLSV DNLTAKISRE QPGWQFYIPD
TRITLDGKPW PSGALTVAWL PQQDVGGENH TRSDELRIRA SNLELAGLEA LRPLAAKLSP
VLGEIWQATQ PSGKIATLAL DIPLQATEKT RFQASWENLA WKQWKLLPGA EHFSGTLAGS
VEDGQMKVAM QQAKMPYETV FRAPLEIENG VATLSWLKNE NGFQLDGRDI DVKAKAVHAR
GGFRYLQPTG DEPWLGILAG ISTDDGSQAW RYFPENLMGK ALVDYLSGAI QGGEADNATL
VYGGNPHLFP YKHNEGQFEV LVPLRNATFA FQPDWPALKN LNIELDFLND GLWMRSDSVD
LGGVKASKLA ATIPDYSKEK LLIDADINGP GKAVGPYFDE TPLKDSLGST LAELQLDGDV
NARLHLDIPL DGEQVTAEGD VSLRNNSLFI KPLNSTLKNL NGKFSFVNGA LKSGPLTANW
FNQPLNLDFS TTEGAKAYQV AVNLNGNWQP TRMGVLPPQL NDALSGSVTW NGKVGIDLPY
HADTTYHIEL NGDLRNVSSH LPSPLNKPAG EAIPVNIQAD GNLKSFALTG SAGSKNHFNS
RWLLNQKLTL DRAIWTTDSR TIPPLPAQQG VELNLPALDG AQWLALFQKG AADNVSSSAE
FPQRVTLRTP ALSLGGQQWN NLSVVSAPSL NGTKIEAQGR EVNATLLMRN HAPWLANIKY
LYYNPGVAKT HASSPTPTSP LASANTISFR GWPDLQLRCE ECWLWGQKYG RIDGDFAIKG
NTLTLANGLI DTGFARLKAN GEWVNAPGNE RTSLKGSLHG SNLDTAAGFF GISTPIQNAS
FNVDYDLHWR NPPWQPEEAT LNGILRTRLG KGEFTDLSSG HAGQLLRLLS FDALLRKLRF
DFRDTFSEGF YFDSIHSTAW IKDGVLHTDD TLVDGLEADI AMKGSVDLVR RRLDMEAVVA
PEISATVGVA AAFAVNPIVG AAVFAASKVL GPLWSKVSIL RYRITGPVDA PQINEVLRQP
IKESQQ