Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3729 |
Symbol | |
ID | 6871698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3576759 |
End bp | 3580559 |
Gene Length | 3801 bp |
Protein Length | 1266 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642786704 |
Product | hypothetical protein |
Protein accession | YP_002217338 |
Protein GI | 198243110 |
COG category | [S] Function unknown |
COG ID | [COG3164] Predicted membrane protein |
TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.424475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.178844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCGAT TGCCGGGGAT TTTATTGCTC ACTGGAGCCG CGCTCATCGT CATTGCAGCG CTGCTGGTTA GCGGGCTGCG CCTGGCGTTG CCTCATCTTG ACGCCTGGCG TCCAGCTATC CTGAATAAAA TTGAGTCCGT GACCGGCGTG CCGGTGGCCG CCAGCCAACT CTCCGCAAGC TGGCAAAATT TTGGCCCTAC GCTGGAAGCG CATAATATTC ATGCCGCCCT GAAAGATGGC GGCGAGCTGT CGATAAAACG CGTTACGCTG GCGCTGGACG TCTGGCAAAG CCTGTTGCAT ATGCGCTGGC AGTTTCGCGA CCTGACCTTC TGGCAACTCA ATTTCCGCAC CAACACGCCT CTTCAAAGCA GCGACGGCAA AGGCATCGAA ACCAGCCGTT TAAGCGATCT TTTCCTGCGT CAGTTCGATC ATTTCGATCT GCGCGATAGC CAAATCAGTT TTCTGACGCT TTCCGGACAA CGCGCGGAGC TGGCGATCCC ACAGCTTACC TGGCTAAACG GCAAAGAGCG GCACCGCGCC GAAGGCGAGG TCAGCCTCTC CAGCCTGACC GGGCAGCACG GCGTGATGCA GGTGCGGATG GATTTACGCG ATGACGACGG TTTGCTGAAT AACGGCAGAG TCTGGTTACA GGCCGACGAT ATTGACGTCA AGCCGTGGCT GGGCAAATGG ATGCAGGATA ATGTGGCGCT CCAGACGGCG CGTTTCAGTC TGGAAGGCTG GATGACGCTC AGTAAAGGCG AAATCGCCGG AGGAGACGTC TGGCTGAAAC AGGGCGGCGC AAGCTGGCTG GGCGATAACA CGACGCACAC GCTGTCTGTC GATAACCTGA CGGCGAAGAT TAGCCGCGAG CAGCCGGGCT GGCAGTTTTA TATTCCGGAC ACACGGATTA CGCTTGATGG TAAACCCTGG CCGAGCGGAG CCTTAACCGT GGCCTGGCTC CCGCAGCAGG ACGTCGGCGG CGAGAATCAC ACACGTAGCG ATGAGCTACG CATTCGCGCC AGTAATCTTG AACTGGCGGG GCTGGAAGCA TTACGTCCGC TGGCGGCTAA ACTGTCGCCT GTGCTGGGCG AAATATGGCA GGCTACGCAG CCGAGCGGAA AGATCGCCAC ACTGGCGCTG GATATTCCGC TACAGGCGAC CGAAAAAACG CGTTTTCAGG CATCGTGGGA AAATCTTGCC TGGAAACAGT GGAAGCTGTT GCCCGGCGCG GAACATTTTT CCGGTACGCT GGCGGGAAGC GTAGAAGACG GGCAGATGAA GGTTGCGATG CAGCAAGCTA AAATGCCCTA TGAAACCGTT TTTCGCGCGC CGCTGGAAAT TGAAAACGGC GTCGCGACGC TTAGCTGGTT GAAGAATGAG AACGGCTTTC AGCTTGATGG CCGCGACATT GACGTCAAAG CAAAGGCGGT ACATGCGCGC GGCGGGTTCC GCTATCTGCA ACCGACGGGC GACGAACCGT GGCTGGGTAT TCTGGCCGGA ATCAGTACCG ATGATGGATC TCAGGCGTGG CGCTATTTTC CGGAAAACCT GATGGGCAAA GCGCTGGTCG ATTACCTTAG CGGCGCGATT CAGGGCGGCG AGGCGGATAA CGCCACGTTG GTTTACGGTG GTAACCCGCA CCTCTTTCCC TATAAGCATA ACGAAGGTCA GTTTGAAGTG CTGGTGCCGC TACGCAATGC GACGTTTGCC TTTCAACCCG ACTGGCCGGC GCTAAAAAAT CTCAACATTG AACTGGATTT CCTGAACGAC GGTCTGTGGA TGCGTTCGGA TAGCGTCGAT TTGGGCGGGG TGAAGGCCAG CAAACTCGCG GCGACGATTC CGGATTATTC CAAAGAGAAA CTGCTCATTG ATGCCGATAT TAACGGGCCG GGAAAAGCCG TTGGGCCTTA TTTTGACGAG ACGCCGCTAA AAGACTCGCT TGGCTCGACG CTGGCGGAGC TCCAGTTAGA TGGCGATGTG AATGCTCGCT TACATCTTGA TATTCCGCTG GACGGAGAAC AGGTTACCGC CGAGGGCGAT GTCTCGTTGC GTAATAACAG TCTGTTTATT AAGCCGCTAA ACAGCACGCT CAAAAATCTG AACGGTAAAT TCAGCTTTGT GAATGGCGCG CTAAAAAGCG GGCCGCTGAC GGCAAACTGG TTTAATCAGC CGCTTAACCT GGATTTCAGT ACGACGGAAG GGGCAAAAGC CTATCAGGTC GCCGTCAACC TGAACGGTAA CTGGCAACCA ACGCGTATGG GCGTCTTACC GCCGCAACTG AATGACGCCC TGAGCGGCAG CGTGACGTGG AATGGTAAAG TCGGCATCGA TCTTCCGTAT CACGCTGACA CCACTTATCA CATCGAGCTG AACGGCGATC TGAGAAATGT GAGCAGTCAC TTACCTTCTC CGCTAAATAA ACCCGCAGGC GAAGCCATTC CGGTGAACAT TCAGGCTGAC GGCAACCTGA AAAGTTTTGC GCTAACGGGG AGCGCAGGGA GTAAAAATCA CTTTAACAGC CGCTGGTTAT TAAATCAGAA GCTGACGTTG GATCGGGCTA TCTGGACGAC GGACAGCCGG ACGATTCCGC CATTACCTGC TCAACAAGGC GTTGAACTCA ATCTGCCGGC GCTGGATGGC GCACAATGGC TGGCGTTATT CCAGAAAGGC GCGGCGGATA ACGTGAGCAG TTCAGCCGAG TTTCCTCAAC GCGTCACGTT GCGTACTCCC GCGCTATCGC TGGGTGGCCA GCAGTGGAAC AATTTGAGCG TCGTTTCAGC CCCCTCGCTG AACGGAACAA AAATTGAAGC GCAGGGCCGT GAGGTGAACG CCACGCTGCT CATGCGCAAC CATGCGCCGT GGCTGGCGAA TATTAAGTAC CTGTACTACA ACCCTGGCGT CGCAAAAACG CACGCCTCGT CACCAACGCC GACATCGCCG TTGGCTTCGG CGAACACGAT TAGCTTCCGC GGCTGGCCGG ACTTACAGCT TCGCTGCGAA GAGTGCTGGC TGTGGGGGCA AAAATATGGG CGTATTGATG GCGATTTCGC CATCAAAGGC AATACGCTGA CTCTGGCGAA TGGCCTGATC GATACCGGAT TCGCCCGTTT GAAAGCGAAC GGCGAGTGGG TGAATGCGCC GGGTAATGAA CGAACCTCGC TGAAAGGTAG TCTGCATGGT AGTAACCTCG ACACGGCTGC CGGGTTCTTC GGTATCTCGA CGCCAATCCA GAACGCGTCT TTTAACGTAG ATTACGATCT GCACTGGCGA AACCCGCCCT GGCAACCTGA GGAAGCCACG CTCAACGGGA TTTTACGTAC GCGTCTGGGT AAAGGCGAGT TTACTGATCT CAGTAGCGGT CATGCCGGAC AGTTACTGCG GCTGCTCAGT TTTGATGCGT TGCTGCGTAA GCTGCGGTTT GACTTCAGAG ATACCTTTAG CGAGGGCTTC TATTTCGACT CTATTCATAG TACCGCGTGG ATTAAAGATG GCGTCCTGCA TACTGACGAT ACGCTGGTGG ATGGGCTGGA AGCGGATATT GCAATGAAAG GTTCTGTTGA TCTGGTGCGT CGTCGTCTTG ATATGGAGGC CGTTGTCGCG CCGGAAATTT CCGCCACAGT GGGCGTCGCC GCCGCGTTTG CCGTTAACCC GATTGTCGGC GCGGCGGTAT TTGCCGCCAG TAAAGTGTTG GGGCCGCTAT GGAGCAAGGT CTCCATTTTG CGATATCGCA TTACCGGTCC GGTCGATGCG CCGCAGATCA ACGAAGTTCT GCGCCAACCG ATAAAAGAAA GCCAGCAATG A
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Protein sequence | MRRLPGILLL TGAALIVIAA LLVSGLRLAL PHLDAWRPAI LNKIESVTGV PVAASQLSAS WQNFGPTLEA HNIHAALKDG GELSIKRVTL ALDVWQSLLH MRWQFRDLTF WQLNFRTNTP LQSSDGKGIE TSRLSDLFLR QFDHFDLRDS QISFLTLSGQ RAELAIPQLT WLNGKERHRA EGEVSLSSLT GQHGVMQVRM DLRDDDGLLN NGRVWLQADD IDVKPWLGKW MQDNVALQTA RFSLEGWMTL SKGEIAGGDV WLKQGGASWL GDNTTHTLSV DNLTAKISRE QPGWQFYIPD TRITLDGKPW PSGALTVAWL PQQDVGGENH TRSDELRIRA SNLELAGLEA LRPLAAKLSP VLGEIWQATQ PSGKIATLAL DIPLQATEKT RFQASWENLA WKQWKLLPGA EHFSGTLAGS VEDGQMKVAM QQAKMPYETV FRAPLEIENG VATLSWLKNE NGFQLDGRDI DVKAKAVHAR GGFRYLQPTG DEPWLGILAG ISTDDGSQAW RYFPENLMGK ALVDYLSGAI QGGEADNATL VYGGNPHLFP YKHNEGQFEV LVPLRNATFA FQPDWPALKN LNIELDFLND GLWMRSDSVD LGGVKASKLA ATIPDYSKEK LLIDADINGP GKAVGPYFDE TPLKDSLGST LAELQLDGDV NARLHLDIPL DGEQVTAEGD VSLRNNSLFI KPLNSTLKNL NGKFSFVNGA LKSGPLTANW FNQPLNLDFS TTEGAKAYQV AVNLNGNWQP TRMGVLPPQL NDALSGSVTW NGKVGIDLPY HADTTYHIEL NGDLRNVSSH LPSPLNKPAG EAIPVNIQAD GNLKSFALTG SAGSKNHFNS RWLLNQKLTL DRAIWTTDSR TIPPLPAQQG VELNLPALDG AQWLALFQKG AADNVSSSAE FPQRVTLRTP ALSLGGQQWN NLSVVSAPSL NGTKIEAQGR EVNATLLMRN HAPWLANIKY LYYNPGVAKT HASSPTPTSP LASANTISFR GWPDLQLRCE ECWLWGQKYG RIDGDFAIKG NTLTLANGLI DTGFARLKAN GEWVNAPGNE RTSLKGSLHG SNLDTAAGFF GISTPIQNAS FNVDYDLHWR NPPWQPEEAT LNGILRTRLG KGEFTDLSSG HAGQLLRLLS FDALLRKLRF DFRDTFSEGF YFDSIHSTAW IKDGVLHTDD TLVDGLEADI AMKGSVDLVR RRLDMEAVVA PEISATVGVA AAFAVNPIVG AAVFAASKVL GPLWSKVSIL RYRITGPVDA PQINEVLRQP IKESQQ
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