Gene SeD_A3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3727 
SymbolaaeR 
ID6875080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3574118 
End bp3575047 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content53% 
IMG OID642786702 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002217336 
Protein GI198246154 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.107486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAT TAAAACGAAT GTCGGTATTC GCCAAAGTTG TTGAGTTTGG CTCTTTTACC 
GCCGCAGCCA GACAGCTGCA AATGAGCGTA TCGTCCATCA GCCAGACTGT GGCGAAACTG 
GAAGATGAGC TTCAGGTTAA ATTGCTCAAC CGCAGCACAC GCAGCATTGG GCTTACCGAG 
GCTGGAAAAA TCTATTATCA GGGCTGTCGT CGTATGCTGC ATGAAGTGCA GGATGTTCAC 
GAGCAGCTTT ACGCTTTTAA TAACACGCCT ATCGGTACAT TGCGTATCGG CTGTTCTTCA 
ACCATGGCGC AAAATGTGCT GGCCGGGCTT ACCGCAAAAT TATTAAAAGA GTATCCCGGT 
CTGGCGGTCA ATCTGGTGAC AGGAATTCCG GCTCCGGATT TAATTGCCGA CGGGCTGGAC 
GTGGTGATCC GCGTGGGCGC GCTGCAAGAC TCCAGCCTGT TTTCCCGTCG ACTTGGCGCG 
ATGCCGATGG TTGTGTGTGC CGCCAAGCCC TACCTCGCTC AGTACGGCGT CCCGGAAAAA 
CCCGCCGATC TCAGTAGCCA TTCCTGGCTG GAATATAGCG TGCGCCCGGA TAATGAGTTT 
GAACTTATTG CGCCGGAAGG AATTTCTACC CGACTGATTC CACAGGGGCG GTTCGTCACT 
AACGATCCGA TGACGCTGGT ACGCTGGCTG ACCGCCGGAA CCGGAATCGC TTATGTGCCG 
CTGATGTGGG TGATCGATGA GATCAATCGT GGCGATCTGG AGATCCTGCT GCCTCGCTAT 
CAGTCCGATC CCCGTCCGGT GTACGCGCTG TACACCGAAA AAGATAAGCT GCCGCTTAAA 
GTGCAGGTAG TGATTAACGC GTTAACTGAC TATTTTGTCG ATGTCGCACA CCTGTTTCAG 
GGAATGCACG GGCGAGGGAA AGAAAAATAA
 
Protein sequence
MERLKRMSVF AKVVEFGSFT AAARQLQMSV SSISQTVAKL EDELQVKLLN RSTRSIGLTE 
AGKIYYQGCR RMLHEVQDVH EQLYAFNNTP IGTLRIGCSS TMAQNVLAGL TAKLLKEYPG 
LAVNLVTGIP APDLIADGLD VVIRVGALQD SSLFSRRLGA MPMVVCAAKP YLAQYGVPEK 
PADLSSHSWL EYSVRPDNEF ELIAPEGIST RLIPQGRFVT NDPMTLVRWL TAGTGIAYVP 
LMWVIDEINR GDLEILLPRY QSDPRPVYAL YTEKDKLPLK VQVVINALTD YFVDVAHLFQ 
GMHGRGKEK