Gene SeD_A3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3724 
SymbolaaeB 
ID6872940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3570820 
End bp3572787 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content53% 
IMG OID642786699 
Productp-hydroxybenzoic acid efflux subunit AaeB 
Protein accessionYP_002217333 
Protein GI198244421 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.269228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATTT TCTCCATTGC CAACCAGCAC ATTCGTTTTG CGGTAAAGCT GGCGTGCGCC 
ATTGTGCTGG CATTATTTAT CGGCTTCCAT TTTCAACTGG AGACGCCGCG TTGGGCGGTG
CTGACCGCCG CGATCGTGGC GGCAGGCCCG GCATTTGCCG CCGGCGGGGA ACCCTATTCC
GGCGCTATCC GTTATCGCGG AATGTTGCGT ATTATCGGGA CGTTTATTGG CTGTATCGCC
GCGCTTATCA TTATTATCTC TATGATCCGC GCGCCGCTAT TGATGATTTT GGTGTGCTGT
GTCTGGGCCG GTTTTTGTAC CTGGATCTCC TCTTTAGTAC GGATCGAAAA CTCTTATGCG
TGGGGACTGT CAGGTTATAC TGCGCTGATC ATTGTGATTA CCATTCAGAC GGAGCCGCTA
CTCACGCCGC AATTTGCGCT TGAACGCTGT AGCGAAATCG TCATCGGCAT TGGCTGCGCT
ATTTTAGCGG ATCTGCTTTT CTCGCCGCGA TCGATAAAGC AGGAGGTTGA TCGCGAACTG
GACAGTTTAC TGGTAGCGCA ATATCAGCTA ATGCAACTTT GTATTAAGCA TGGCGACAGC
GAAGAAGTCG ACAACGCCTG GGGCGATCTG GTGCGACGCA CGGCGGCGCT GGAGGGGATG
CGAAGTAATC TGAATATGGA ATCTTCGCGC TGGGTACGCG CTAACCGCCG CCTGAAAGCG
TTGAATACGC TTTCGCTCAC GCTGATTACG CAATCCTGTG AAACTTATCT TATTCAAAAC
ACGCGGCCGG AACTGATTAC CGATACATTC CGGGAACTGT TCGAGACGCC GGTTGAAACG
GTACAGGACG TCCACAGGCA GTTAAAACGG ATGCGGCGTG TTATTGTCTG GACCGGCGAG
CGCGAAACGC CCGTCACGCT TTATAGTTGG GTAGGCGCTG CGACGCGCTA TCTGCTGCTT
AAACGCGGCG TGATCAGCAA CACCAAAATC AGCGCGACGG AAGAAGAGAT CCTGCAAGGC
GAGCCCGTAG TTAAAGTGGA ATCCGCTGAA CGCCACCATG CGATGGTGAA CTTCTGGCGC
ACCACGCTTT CCTGCATTCT GGGGACATTA TTCTGGCTAT GGACCGGCTG GACATCGGGT
AATGGCGCGA TGGTGATGAT TGCTGTGGTG ACCTCGCTGG CGATGCGTTT ACCCAATCCG
CGCATGGTCT GCATTGATTT TATTTATGGC ACTCTGGCGG CGTTGCCGCT GGGATTGCTC
TATTTCCTGG TGATTATTCC CAATACGCAG CAAAGTATGC TGTTGTTATG TTTGAGCCTG
GCGGTATTGG GGTTCTTTAT CGGCATTGAG GTCCAGAAAC GGCGTCTGGG GTCGATGGGG
GCGCTGGCCA GTACGATTAA CATTATTGTG TTGGATAATC CGATGACGTT CCATTTCAGC
CAGTTCCTCG ACAGCGCGTT GGGGCAAATT GTTGGCTGTA TGCTGGCGTT TATCGTCATC
CTGCTGGTGC GTGATAAATC CAAAGATCGA ACCGGTCGCG TGCTGCTTAA TCAGTTTGTT
TCCGCTGCGG TCTCGGCAAT GACGACCAAC GTGGTACGTC GTAAAGAAAA CCGTCTGCCT
GCGTTATATC AGCAACTCTT TTTGCTGATG AATAAATTTC CTGGCGATTT GCCGAAGTTC
CGCCTGGCGC TAACGATGAT CATTGCTCAT CAACGTCTGC GCGACGCGCC GATACCGGTT
AATGAAGATC TGTCAGTGTT CCACCGTCAG CTTCGTCGTA CCGCAGACCA TGTTATTTCC
GCCGGAAGCG ATGATAAACG GCGACGCTAC TTTGGTCAGT TGCTGGATGA GCTGGATATC
TATCAGGAGA AATTACGTAT CTGGGAGGCG CCGCCGCAGG TGACGGAACC GGTTAAACGC
CTGACGGGTA TGTTACATAA ATACCAGAAC GCGCTTACCG ATAGCTAA
 
Protein sequence
MGIFSIANQH IRFAVKLACA IVLALFIGFH FQLETPRWAV LTAAIVAAGP AFAAGGEPYS 
GAIRYRGMLR IIGTFIGCIA ALIIIISMIR APLLMILVCC VWAGFCTWIS SLVRIENSYA
WGLSGYTALI IVITIQTEPL LTPQFALERC SEIVIGIGCA ILADLLFSPR SIKQEVDREL
DSLLVAQYQL MQLCIKHGDS EEVDNAWGDL VRRTAALEGM RSNLNMESSR WVRANRRLKA
LNTLSLTLIT QSCETYLIQN TRPELITDTF RELFETPVET VQDVHRQLKR MRRVIVWTGE
RETPVTLYSW VGAATRYLLL KRGVISNTKI SATEEEILQG EPVVKVESAE RHHAMVNFWR
TTLSCILGTL FWLWTGWTSG NGAMVMIAVV TSLAMRLPNP RMVCIDFIYG TLAALPLGLL
YFLVIIPNTQ QSMLLLCLSL AVLGFFIGIE VQKRRLGSMG ALASTINIIV LDNPMTFHFS
QFLDSALGQI VGCMLAFIVI LLVRDKSKDR TGRVLLNQFV SAAVSAMTTN VVRRKENRLP
ALYQQLFLLM NKFPGDLPKF RLALTMIIAH QRLRDAPIPV NEDLSVFHRQ LRRTADHVIS
AGSDDKRRRY FGQLLDELDI YQEKLRIWEA PPQVTEPVKR LTGMLHKYQN ALTDS