Gene SeD_A3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3718 
Symbol 
ID6872236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3566746 
End bp3567375 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID642786693 
Productputative GntR family transcriptional regulator 
Protein accessionYP_002217327 
Protein GI198243564 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.510184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.423567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGA TCCAAAGAAC GCAAACCCGC GATCACATTA CGCAAATGCT TCGCTATGAA 
ATTCTTTCCG GCAATATAAA AGCGGGAGAA GAACTCGCGC AGGAAAGTAT TGCGGAGCAG 
CTTGGTCTTT CACGAATGCC GGTTCGAGAA GCGCTACAGT CACTCGAACA GGAAGGTTTT 
TTAATCCGAC TGCCCAACAG GCACATGCAG GTCGCGCATC TTGAGGCCGA TCGCGTGAGT 
CATATTTTTC GCGTAATTGC CGCGATGGCC GCCGAAATGT TTTCGCTGAT ACCCAGCGAA 
GTAGGCGATG CCCTCCTGAT ACGTGCGCAA GCGCTGGCTG TCGCAGAAGA CAAATCCTGC 
GAACTGGAGT GTCATGCGAT GCTGATTTCT TATGTGAATA ACCGCTATCT GGAAAAGGTG 
TATCAGCAGT TCCTGGACGG TTATGTCTCT TATGTTATTT TGCATCTGAA AAAAGATAAT 
CAGGAGTCGG CGCAGCTTTT CGCTGAACTG GCTGACGTCA TACGCCAGGG GCGGCGTGAT 
GAGATTGGGC AAGTTATGCA GCGTTATTTC CTCTCTTTAG CAGAAATAAT GCGTCAACAT 
ATGAAGGATT GGGAAAGTGC AGAAGCCTAA
 
Protein sequence
MKKIQRTQTR DHITQMLRYE ILSGNIKAGE ELAQESIAEQ LGLSRMPVRE ALQSLEQEGF 
LIRLPNRHMQ VAHLEADRVS HIFRVIAAMA AEMFSLIPSE VGDALLIRAQ ALAVAEDKSC 
ELECHAMLIS YVNNRYLEKV YQQFLDGYVS YVILHLKKDN QESAQLFAEL ADVIRQGRRD 
EIGQVMQRYF LSLAEIMRQH MKDWESAEA