Gene SeD_A3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3716 
Symbol 
ID6871951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3564615 
End bp3565883 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content53% 
IMG OID642786691 
Productanion transporter 
Protein accessionYP_002217325 
Protein GI198242565 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.672339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCA TTACCCTTAC CTTATGTTTA TTGGTGTTCG CTATCGTCAT GTTTGTATGG 
GAAAAAGTGC CACTTGCCGT CACTTCCATG ATTGTCTGCG TGGCCTTAGT GATCACCGGC
GTTCTGAATA TCAAACAGGC CTTTGCTGGC TTTATCGACA CTAACGTTAT CCTCTTTGTC
GCGATGTTCA TCGTGGGCGG TGCGTTGTTC GAGACCGGTA TGGCAAACAA AGTGGGCGGC
GTCATCACGC GCTTCGCGAA AACAGAAAAA CAGCTGATCT TCACCATTAT GGTGGTGGTG
GGTTTGATGT CTGGCGTCCT CTCTAACACC GGTACCGCTG CGGTTTTGAT TCCGGTGGTG
ATCGGCGTGG CGGCAAAATC GGGCTTCTCG CGTTCTCGTC TACTGATGCC GCTGGTTTTC
GCCGCTGCGT TGGGCGGTAA CCTGTCGTTA ATTGGCGCGC CGGGAAATCT TATCGCGCAG
TCTGCGCTAC AGAATATTGG CGGCGGCTTT GGCTTTTTTG AATACGCAAA AATCGGTCTC
CCGATGCTCA TCTGCGGCAT TCTCTACTTC CTGACTATTG GCTATCGCTT TCTGCCGAAT
AATGCGACCG GCGGTGAGGT GGGGAGCGTC GGGGAGCAAC GTGACTACAG CCATGTTCCA
CAGTGGAAAC AACGGCTCTC ACTGGTGGTG TTGATCGCAA CGATCCTCGG CATGATCTTT
GAGAAGAAGA TCGGTGTCAG CCTGGCCGTG ACCGGTTGTA TTGGCGCTCT TGTGCTGGTA
GTTACCGGCG TACTCACGGA AAAACAGGCC TATAAAGCCA TTGATTCACA GACTATTTTT
ATCTTTGGCG GCACCCTGGC GCTGGCAAAA GCGCTGGAAA TGACCGGGGC AGGCAAGCTG
GTTGCGGACT ATGTAATCGG CATGCTGGGG CAAAACTCTT CACCGTTCAT GTTGCTGATC
GCCGTTTTCG CCTTATCCGT TGTGATGACC AACTTTATGT CCAATACCGC AACGACAGCG
CTATTGGTGC CGGTGAGTTT GTCCATTGCC GCAGGTATGG GGGCCGACCC GCGTGCGGTT
CTGATGGCGA CGGTCATTGG CGGTTCCTGC GCCTACGCAA CCCCTATCGG TATGCCTGCC
AACATGATGG TGCTCTCCGC GGGTGGCTAT AAATTTGTCG ACTACGCTAA GGCCGGTATC
CCCCTGATTA TCGTTTCAAC CATTGTCAGC TTGATCCTGC TGCCAATCCT TTTCCCTTTT
CATCCGTAA
 
Protein sequence
MEPITLTLCL LVFAIVMFVW EKVPLAVTSM IVCVALVITG VLNIKQAFAG FIDTNVILFV 
AMFIVGGALF ETGMANKVGG VITRFAKTEK QLIFTIMVVV GLMSGVLSNT GTAAVLIPVV
IGVAAKSGFS RSRLLMPLVF AAALGGNLSL IGAPGNLIAQ SALQNIGGGF GFFEYAKIGL
PMLICGILYF LTIGYRFLPN NATGGEVGSV GEQRDYSHVP QWKQRLSLVV LIATILGMIF
EKKIGVSLAV TGCIGALVLV VTGVLTEKQA YKAIDSQTIF IFGGTLALAK ALEMTGAGKL
VADYVIGMLG QNSSPFMLLI AVFALSVVMT NFMSNTATTA LLVPVSLSIA AGMGADPRAV
LMATVIGGSC AYATPIGMPA NMMVLSAGGY KFVDYAKAGI PLIIVSTIVS LILLPILFPF
HP