Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3715 |
Symbol | |
ID | 6871344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3563683 |
End bp | 3564582 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642786690 |
Product | tartrate dehydratase subunit alpha |
Protein accession | YP_002217324 |
Protein GI | 198242688 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA GTGAACAGAT ATCCCATATG ACCGACGTTA TGGCCAAGTT TGTGGGATAT ACCGGCAAAG TTTTGCCTGA TGATGTCACT GCAAAACTGG AAGATTTGCA TAAGAAAGAG ACCAGTAAAC TGGCCGACGT CATCTTTACT ACCATGATTG AGAACCAGCG TCTGGCGAAA GAGCTGGATC GACCTTCCTG CCAGGACACC GGTGTCATTC AGTTTCTGGT GGAGTGCGGG ACGAACTTTC CGCTGATTGG CGAGCTGGAA GCGTTGTTGC GTGAGGCGGT GATCAAAGCA ACTGTCGATT CTCCGCTGCG CCACAACAGC GTAGAAACTT TTGATGAATA CAACACCGGT AAAAACGTGG GTAAAGGTAC GCCGACGGTC TTCTGGGAGA TCGTTCCCAA TTCCGATCAG TGCAGCATTT ATACCTATAT GGCGGGCGGC GGTTGTTCCC TGCCGGGGAA AGCGATGGTG CTGATGCCGG GTGCAGGCTA TGAAGGTGTG ACCCGCTTTG TACTGGATGT GATGACCAGC TACGGCCTCA ACGCGTGTCC GCCGCTGCTG GTTGGCGTGG GCGTAGCGAC CTCTGTTGAA ACGGCGGCAC TGCTATCGAA AAAAGCGCTG ATGCGTCCGA TCGGTTCGCA TAACGAGAAT GAGCGTGCAG CCTCGCTGGA AAAAATGCTG GAAGAAGGCA TTAACAAAAT TGGCCTGGGG CCGCAGGGGA TGTCCGGTAA TACCTCCGTT ATGGGCGTGA ACATTGAAAA CACCGCGCGT CATCCTTCTA CCATCGGCGT GGCGGTAAAC GTCGGCTGCT GGTCGCACCG TAAAGGGCAT ATCGTTTTCG ATAAAGATTT GAATTACACC ATTACGTCTC ACAGCGGAGT GAATTTCTGA
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Protein sequence | MSKSEQISHM TDVMAKFVGY TGKVLPDDVT AKLEDLHKKE TSKLADVIFT TMIENQRLAK ELDRPSCQDT GVIQFLVECG TNFPLIGELE ALLREAVIKA TVDSPLRHNS VETFDEYNTG KNVGKGTPTV FWEIVPNSDQ CSIYTYMAGG GCSLPGKAMV LMPGAGYEGV TRFVLDVMTS YGLNACPPLL VGVGVATSVE TAALLSKKAL MRPIGSHNEN ERAASLEKML EEGINKIGLG PQGMSGNTSV MGVNIENTAR HPSTIGVAVN VGCWSHRKGH IVFDKDLNYT ITSHSGVNF
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