Gene SeD_A3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3714 
Symbol 
ID6875702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3563066 
End bp3563683 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content46% 
IMG OID642786689 
ProductL(+)-tartrate dehydratase subunit beta 
Protein accessionYP_002217323 
Protein GI198242113 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 
TIGRFAM ID[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA AAATCCTGAC TACGCCAATT AAAGATGAAG ATTTAGCGGA TATTAAGGCT 
GGCGATATTA TTTATCTCAA TGGTCATATT GTTACCTGCC GTGACGTAGC CCATCGCCGT
TTAATTGAAG GTGGTCGCGA GCTTCCGGTA GATGTTCGCG GCGGCGCTAT TTTACACGCT
GGCCCCATTG TCCGCCCAAT TAAAGGCGAA GACGATAAGT TTGAAATGGT CTCCGTTGGA
CCAACCACCA GCATGCGTAT GGAGAAATTC GAAAAAGAAT TTATTGCGCA GACCGGCGTG
AAATTAATTG TGGGTAAAGG CGGTATGGGT AAAGGTACCG AAGAGGGCTG TGCTGAACAC
AAAGCGCTGC ACTGCGTATT CCCTGCCGGT TGTGCGGTTG TAGCCGCCGT GTGCGTGGAA
GAAATTGAAG ATGCCCAATG GCGCGATCTG GGGATGCCGG AAACTCTGTG GCTCTGTCGG
GTTAAAGAGT TTGGCCCGCT GATTGTTTCT ATTGATACCC ATGGGAATAA TCTGTTTGAA
CAGAACAAAA TTATTTTTAA TCAGCGTAAA GAGATCGTCG CTGATGAAAT ATGCCAGAAC
GTAAGTTTCA TCAAATAA
 
Protein sequence
MTKKILTTPI KDEDLADIKA GDIIYLNGHI VTCRDVAHRR LIEGGRELPV DVRGGAILHA 
GPIVRPIKGE DDKFEMVSVG PTTSMRMEKF EKEFIAQTGV KLIVGKGGMG KGTEEGCAEH
KALHCVFPAG CAVVAAVCVE EIEDAQWRDL GMPETLWLCR VKEFGPLIVS IDTHGNNLFE
QNKIIFNQRK EIVADEICQN VSFIK