| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3711 |
|---|
| Symbol | |
|---|
| ID | 6873626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 3559565 |
|---|
| End bp | 3560866 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642786686 |
|---|
| Product | oxaloacetate decarboxylase beta chain |
|---|
| Protein accession | YP_002217320 |
|---|
| Protein GI | 198244641 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTC TGAACGCCCT GCTTCAGGGC ATGGGGCTGA TGCACCTTGG CGCAGGCCAG
GCCATCATGC TGCTGGTCAG CCTGCTGCTG CTGTGGCTGG CGATTGCGAA AAAGTTCGAA
CCGTTACTGC TGCTGCCGAT TGGCTTCGGC GGCCTGCTCT CCAACATCCC GGAAGCGGGT
ATGGCGCTGA CCGCGCTGGA GAGCCTGCTG GCGCATCACG ACGCCGGGCA GCTGGCGGTG
ATTGCCGCGA AGCTCAACTG CGCGCCGGAC GTGCATGCCA TTAAAGAGGC GTTAGCGCTG
GCGCTGCCCT CCGTCCAGAA CCAGATGGAA AATCTGGCGG TGGACATGGG CTACACGCCT
GGCGTACTGG CGCTGTTCTA CAAAGTGGCG ATTGGTTCCG GTGTCGCGCC GCTGGTCATC
TTCATGGGCG TCGGCGCGAT GACCGACTTC GGCCCGCTGC TGGCCAACCC GCGCACCCTG
CTGCTGGGGG CGGCGGCGCA GTTCGGTATC TTCGCCACGG TGCTCGGGGC GCTGACGCTG
AACTACTTCG GCCTTATCAG CTTCACCCTG CCGCAGGCGG CGGCCATCGG CATTATCGGC
GGCGCGGACG GCCCGACGGC GATTTACCTG TCGGGCAAGC TGGCGCCGGA GCTGCTGGGG
GCCATCGCGG TGGCGGCGTA CTCGTATATG GCGCTGGTGC CGTTAATCCA GCCGCCGATT
ATGAAGGCGC TGACCACGGA GACGGAGCGG AAAATCCGCA TGGTGCAGCT GCGCACCGTC
AGCAAGCGGG AAAAAATCCT CTTCCCGGTG GTGTTGCTCA TGCTGGTGGC GCTGCTGCTG
CCGGACGCCG CGCCGCTGCT GGGGATGTTC TGCTTTGGCA ATCTGATGCG TGAAAGCGGC
GTGGTGGAGC GTCTGAGCGA CACGGTACAG AACGGGCTGA TTAATATCGT CACCATCTTC
CTCGGGCTGT CGGTGGGCGC GAAGCTGGTG GCGGACAAGT TCCTGCAGCC GCAGACGCTG
GGCATTCTGC TGCTGGGGGT GGTTGCCTTT GGTATCGGGA CGGCGGCCGG GGTACTGATG
GCGAAGCTGC TGAACCTGTG CAGTAAGAAC AAAATTAACC CGCTTATCGG TTCGGCGGGG
GTCTCGGCGG TGCCGATGGC GGCCCGCGTA TCGAACAAGG TGGGCCTGGA GTCGGACCCG
CAGAACTTTC TGCTGATGCA CGCGATGGGC CCGAACGTGG CCGGGGTGAT TGGCTCGGCC
ATTGCCGCGG GCGTGATGCT GAAGTACGTG CTGGCAATGT AA
|
|---|
| Protein sequence | MESLNALLQG MGLMHLGAGQ AIMLLVSLLL LWLAIAKKFE PLLLLPIGFG GLLSNIPEAG
MALTALESLL AHHDAGQLAV IAAKLNCAPD VHAIKEALAL ALPSVQNQME NLAVDMGYTP
GVLALFYKVA IGSGVAPLVI FMGVGAMTDF GPLLANPRTL LLGAAAQFGI FATVLGALTL
NYFGLISFTL PQAAAIGIIG GADGPTAIYL SGKLAPELLG AIAVAAYSYM ALVPLIQPPI
MKALTTETER KIRMVQLRTV SKREKILFPV VLLMLVALLL PDAAPLLGMF CFGNLMRESG
VVERLSDTVQ NGLINIVTIF LGLSVGAKLV ADKFLQPQTL GILLLGVVAF GIGTAAGVLM
AKLLNLCSKN KINPLIGSAG VSAVPMAARV SNKVGLESDP QNFLLMHAMG PNVAGVIGSA
IAAGVMLKYV LAM
|
|---|
| |