Gene SeD_A3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3700 
Symbol 
ID6872209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3549981 
End bp3550763 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content52% 
IMG OID642786676 
Producttranscriptional regulator NanR 
Protein accessionYP_002217310 
Protein GI198244550 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT TTGATTCGCA AGCAGAAGAT TCACCGACAT CCCTCGGGCG TAGTTTGCGC 
CGCCGCCCGC TGGCGCGTAA AAAACTGTCT GAAATGGTTG AGGAAGAGCT GGAGCAGATG 
ATCCGCCGTC ATGAGTTTGG CGAGGGAGAA CAGCTACCGT CTGAACGTGA ATTAATGGCC 
TTCTTCAATG TGGGACGTCC CTCCGTGCGT GAAGCGTTAG CTGCGCTGAA GCGTAAAGGT 
CTGGTGCAAA TCAATAACGG CGAACGCGCC CGCGTCTCGC GCCCCTCTGC TGATACCATC 
ATCAGCGAAC TGTCGGGTAT GGCGAAAGAT TTTCTTACTC ATCCTGGCGG CATCGCTCAC 
TTTGAACAGC TACGGCTTTT CTTTGAATCC AGCCTGGTAC GCTATGCGGC GGAACATGCC 
ACCGACGAGC AGATCGCGTT GTTAACGAAA GCGCTGGAAA TTAATAGCCA GTCGCTGGAT 
GACAACGCGC TGTTTATTCG TTCGGATGTC GAGTTTCACC GGGTGTTGGC TGAAATTCCC 
GGCAATCCGA TCTTTATGGC TATTCATGTT GCTCTGCTGG ACTGGCTAAT CGCCGCTCGC 
CCAAGCGTTC CCGATCGTGA GCTGCATGAA CATAATAACG TGAGTTATCA ACAGCATATT 
GTGATTGTTG ATGCCATTCG CCAGCGAGAT CCCGATAAAG CGGATCGCGC TCTGCAAACC 
CACCTCAATA GCGTTTCCGC TACCTGGCAC GCACTCGGTA AAAAAAGTCA AAAAATGCGG 
TAG
 
Protein sequence
MNAFDSQAED SPTSLGRSLR RRPLARKKLS EMVEEELEQM IRRHEFGEGE QLPSERELMA 
FFNVGRPSVR EALAALKRKG LVQINNGERA RVSRPSADTI ISELSGMAKD FLTHPGGIAH 
FEQLRLFFES SLVRYAAEHA TDEQIALLTK ALEINSQSLD DNALFIRSDV EFHRVLAEIP 
GNPIFMAIHV ALLDWLIAAR PSVPDRELHE HNNVSYQQHI VIVDAIRQRD PDKADRALQT 
HLNSVSATWH ALGKKSQKMR