Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3688 |
Symbol | |
ID | 6875792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3531327 |
End bp | 3533663 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642786665 |
Product | aerobic respiration control sensor protein ArcB |
Protein accession | YP_002217299 |
Protein GI | 198246231 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.739542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAA TTCGTATGCT GGCGCAATAC TATGTCGACC TGATGATGAA ATTGGGTCTG GTGCGCTTTT CCATGCTCCT GGCGTTGGCA TTGGTGGTGC TGGCGATTGT CGTGCAGATG GCGGTGACCA TGGTGCTGCA TGGTCAGGTT GAAAGTATCG ACGTTATTCG TTCCATCTTT TTTGGCCTGT TAATTACGCC CTGGGCGGTC TATTTCTTAT CCGTTGTTGT TGAACAACTG GAAGAGTCAA GGCAGCGACT GTCGCGTCTG GTGCAAAAGC TGGAGGAGAT GCGCGAGCGC GATCTCAAGC TTAACGTACA GTTGAAGGAC AATATTGCCC AGCTTAATCA GGAAATTGCC GATCGCGAAA AAGCGGAAGC GGAGCTGCAA GAGACATTTG AACAGCTAAA AGTAGAAATT AAAGAGCGTG AAGAAGCGCA AATCCAGCTA GAACAGCAAT CCTCTTTTCT GCGCTCCTTT CTGGACGCCT CGCCGGATTT GGTTTTTTAT CGTAATGAGG ATAAAGAATT TTCCGGCTGT AACCGCGCAA TGGAATTGCT AACCGGCAAG AGCGAAAAAC AGCTGGTGCA TTTGAAGCCG GAAGATGTGT ACTCTCCCGA AGCGGCGGAG AAAGTCATTG AAACCGATGA AAAAGTATTC CGCCATAACG TCTCCCTGAC CTACGAACAG TGGCTGGATT ACCCGGACGG ACGAAAGGCC TGCTTTGAAA TTCGTAAAGT GCCTTATTAC GACCGTGTCG GTAAACGTCA TGGCCTGATG GGATTTGGTC GTGATATTAC CGAACGTAAG CGTTATCAGG ACGCGCTGGA ACGCGCCAGC CGCGACAAGA CCACATTTAT CTCTACCATC AGTCATGAGC TGCGCACCCC GCTTAACGGC ATCGTCGGTT TAAGCCGCAT CCTGCTGGAT ACCGATCTTA CCGCCGAACA GGAAAAATAC CTTAAGACAA TCCATGTCTC CGCCGTGACG TTAGGCAATA TTTTCAATGA TATCATTGAT ATGGATAAGA TGGAGCGGCG TAAGGTTCAG CTTGATAACC AACCGGTTGA TTTCACCAGC TTTATGGCCG ATCTGGAAAA CCTTTCCGGT TTGCAGGCGC AGCAAAAAGG GCTACGTTTT GTGCTTGAGC CGACGCTGCC GCTGCCGCAC AAAGTCATTA CCGACGGAAC GCGTCTGCGC CAGATTTTAT GGAATTTGAT CAGCAATGCG GTGAAATTTA CTCAGCAGGG CCAGGTGACG GTGCGGGCGC GCTATGATGA AGGCGACATG CTGCACTTTG AAGTGGAAGA TTCCGGGATC GGCATTTCGC AGGATGAGCA GGATAAAATT TTCGCCATGT ATTATCAGGT GAAAGACAGT CATGGCGGTA AACCGGCGAC GGGTACCGGT ATCGGGCTGG CGGTCTCCCG TCGGCTGGCG AAAAATATGG GCGGCGATAT TACCGTTTCC AGTCTGCCGG GCAAAGGATC GACCTTTACG CTAACGGTTC ATGCGCCAGC GGTGGCGGAA GAGGTGGAGG ACGCCTTTGA TGAAGACGAC ATGCCGCTGC CGGCGCTGCA TGTTCTGCTG GTCGAAGATA TTGAACTGAA CGTGATCGTA GCGCGTTCGG TACTGGAAAA ACTGGGTAAC AGCGTGGATG TCGCGATGAC CGGCAAGGCG GCGCTGGAGA TGTTCGCGCC GGGCGAATAT GACCTGGTCT TACTGGATAT TCAACTACCG GATATGACGG GGCTGGATAT TGCCAGAGAA CTGACCCGTC GCCACACGCG GGAAGATTTA CCGCCGCTGG TAGCGCTTAC GGCTAACGTT CTGAAAGATA AAAAAGAGTA TCTGGACGCT GGTATGGACG ATGTGCTGAG TAAGCCGCTG TCGGTGCCGG CCTTAACCGC GATGATTAAA AAATTCTGGG ATGCCACCGA TAAAGAGGAG AGTACCGTGA CGCCTGAAGA GAGCGATAAA GCGCAAGCGC TGCTGGATAT CCCGATGCTG GAACAATACA TTGAGTTGGT TGGGCCTAAA TTGATCACCG ACGGTCTCGC GGTGTTTGAA AAAATGATGC CTGGCTATTT AAGCGTGCTG GAGTCCAATC TGACGGCGCG TGACAAAAAA GGCGTCGTTG AGGAAGGGCA TAAGATTAAA GGCGCCGCCG GTTCGGTAGG GCTGCGTCAT CTGCAACAGC TTGGCCAGCA AATCCAGTCG CCGGATCTTC CCGCCTGGGA AGATAATGTC GCGGAATGGA TTGAAGAGAT GAAACAGGAG TGGCAGCACG ATGTCGCGGT GCTGAAAGCC TGGGTGGCAA ACGCGGAAAA AAAATGA
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Protein sequence | MKQIRMLAQY YVDLMMKLGL VRFSMLLALA LVVLAIVVQM AVTMVLHGQV ESIDVIRSIF FGLLITPWAV YFLSVVVEQL EESRQRLSRL VQKLEEMRER DLKLNVQLKD NIAQLNQEIA DREKAEAELQ ETFEQLKVEI KEREEAQIQL EQQSSFLRSF LDASPDLVFY RNEDKEFSGC NRAMELLTGK SEKQLVHLKP EDVYSPEAAE KVIETDEKVF RHNVSLTYEQ WLDYPDGRKA CFEIRKVPYY DRVGKRHGLM GFGRDITERK RYQDALERAS RDKTTFISTI SHELRTPLNG IVGLSRILLD TDLTAEQEKY LKTIHVSAVT LGNIFNDIID MDKMERRKVQ LDNQPVDFTS FMADLENLSG LQAQQKGLRF VLEPTLPLPH KVITDGTRLR QILWNLISNA VKFTQQGQVT VRARYDEGDM LHFEVEDSGI GISQDEQDKI FAMYYQVKDS HGGKPATGTG IGLAVSRRLA KNMGGDITVS SLPGKGSTFT LTVHAPAVAE EVEDAFDEDD MPLPALHVLL VEDIELNVIV ARSVLEKLGN SVDVAMTGKA ALEMFAPGEY DLVLLDIQLP DMTGLDIARE LTRRHTREDL PPLVALTANV LKDKKEYLDA GMDDVLSKPL SVPALTAMIK KFWDATDKEE STVTPEESDK AQALLDIPML EQYIELVGPK LITDGLAVFE KMMPGYLSVL ESNLTARDKK GVVEEGHKIK GAAGSVGLRH LQQLGQQIQS PDLPAWEDNV AEWIEEMKQE WQHDVAVLKA WVANAEKK
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