Gene SeD_A3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3686 
SymbolelbB 
ID6871576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3530447 
End bp3531100 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content58% 
IMG OID642786664 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_002217298 
Protein GI198241845 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTGGCGTAGT GCTCAGCGGA TGCGGCGTCT ATGACGGCGC CGAAATTCAT 
GAGGCCGTTC TGACGCTGTT GGCCATTGCC CGCAGCGGCG CGCAGGCTGT CTGCTTCGCG
CCGGATAAAC CACAAGCGGA TGTTATTAAT CACCTGACCG GCGAAGCGAT GGCGGAAACG
CGTAACGTCC TGATTGAGGC GGCGCGTATT ACGCGGGGCG ATATTCGTCC CCTGTCCCAG
GCTCAGCCAG AGGAGCTGGA TGCGCTCATT GTGCCTGGTG GTTTCGGCGC GGCGAAGAAC
CTGAGTAATT TCGCCAGCCA GGGGAGCGAA TGCCGGGTGG ATAGCGATGT CGTCGCGCTG
GCGAAGGCCA TGCACCAGTC CGGCAAGCCG CTGGGATTCA TCTGTATCGC GCCCGCAATG
TTGCCGAAAA TCTTTGACTT CCCGCTACGT CTGACAATAG GGACGGATAT TGATACCGCT
GAAGTACTTG AAGAGATGGG CGCCGAACAC GTACCTTGCC CGGTTGATGA TATCGTTGTG
GACGAGGATA ACAAGGTCGT GACCACCCCT GCCTATATGC TGGCGCAGGA TATCGCCCAG
GCGGCAAGCG GCATTGATAA ATTAGTGTCG CGCGTGCTGG TTCTGGCGGA ATGA
 
Protein sequence
MKKIGVVLSG CGVYDGAEIH EAVLTLLAIA RSGAQAVCFA PDKPQADVIN HLTGEAMAET 
RNVLIEAARI TRGDIRPLSQ AQPEELDALI VPGGFGAAKN LSNFASQGSE CRVDSDVVAL
AKAMHQSGKP LGFICIAPAM LPKIFDFPLR LTIGTDIDTA EVLEEMGAEH VPCPVDDIVV
DEDNKVVTTP AYMLAQDIAQ AASGIDKLVS RVLVLAE