Gene SeD_A3685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3685 
SymbolmtgA 
ID6872801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3529722 
End bp3530450 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content56% 
IMG OID642786663 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_002217297 
Protein GI198242333 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0191887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.869466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GACGCATCGC GCCGTTAACG TTTTTGCGCC GTCTACTTTT ACGTATCCTT 
GCTGCGCTCG CCGTCTTTTG GGGCGGCGGC ATTGCGCTGT TTAGCGTGGT TCCGGTGCCT
TTTTCGGCGG TGATGGCGGA ACGGCAGATT AGCGCCTGGC TCGGCGGAGA GTTCGGTTAT
GTGGCGCATT CTGACTGGGT CAGTATGGCG GATATCTCGC CGTGGATGGG GCTGGCGGTA
ATTGCGGCGG AAGACCAGAA GTTCCCTGAG CACTGGGGCT TTGATGTTCC GGCGATTGAA
AAAGCGCTGG CGCATAATGA GCGGAATGAG AGCCGTATTC GCGGCGCCTC TACGCTTTCG
CAGCAAACGG CGAAAAATCT CTTTTTATGG GATGGACGCA GTTGGCTGCG CAAAGGTCTG
GAGGCCGGGC TAACGCTGGG CATTGAAACT GTCTGGAGCA AAAAGCGCAT TCTCACGGTT
TCTCTGAATA TCGCGGAGTT TGGCGATGGT ATTTTTGGCG TGGAGGCTGC GGCACAACGG
TATTTTCATA AACCTGCCAG TCGCTTGAGT GTGTCTGAAG CCGCGTTGCT GGCGGCGGTA
TTGCCAAATC CGTTACGCTA TAAGGCGAAT GCGCCGTCTG GCTATGTGCG TAGCCGGCAG
GCGTGGATTA TGCGCCAGAT GCGACAACTG GGCGGGGAAT CTTTTATGAC GCGCAACCAG
CTTAATTAA
 
Protein sequence
MSKRRIAPLT FLRRLLLRIL AALAVFWGGG IALFSVVPVP FSAVMAERQI SAWLGGEFGY 
VAHSDWVSMA DISPWMGLAV IAAEDQKFPE HWGFDVPAIE KALAHNERNE SRIRGASTLS
QQTAKNLFLW DGRSWLRKGL EAGLTLGIET VWSKKRILTV SLNIAEFGDG IFGVEAAAQR
YFHKPASRLS VSEAALLAAV LPNPLRYKAN APSGYVRSRQ AWIMRQMRQL GGESFMTRNQ
LN