| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3678 |
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| Symbol | lptB |
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| ID | 6871976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3524471 |
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| End bp | 3525196 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642786656 |
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| Product | putative ABC transporter ATP-binding protein YhbG |
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| Protein accession | YP_002217290 |
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| Protein GI | 198242245 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.156461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACAT TAACTGCAAA GAATCTGGCG AAGGCCTATA AAGGCCGTCG CGTAGTGGAA
GATGTCAGTC TGACCGTTAA CTCCGGGGAG ATTGTCGGGC TGCTCGGTCC AAACGGCGCG
GGTAAAACCA CCACCTTTTA TATGGTCGTC GGTATCGTGC CGCGTGACGC AGGCAATATC
ATCATCGATG ATGAAGATAT CAGTCTGCTG CCGCTGCACG CGCGCGCGCG CCGCGGTATC
GGCTATTTGC CGCAGGAAGC TTCTATTTTC CGCCGTCTCA GCGTATTTGA TAACCTGATG
GCGGTACTGC AAATTCGTGA CGATTTGACC GCAGAACAGC GAGAAGACCG CGCCAACGAG
CTGATGGAAG AGTTTCATAT CGAGCATCTG CGCGACAGCA TGGGACAGGC GCTGTCCGGT
GGTGAACGCC GTCGTGTAGA AATAGCCCGC GCGTTGGCCG CTAATCCCAA ATTTATCCTG
CTGGATGAAC CCTTTGCCGG CGTTGACCCG ATTTCCGTTA TCGACATCAA ACGCATTATC
GAGCATCTGC GCGATAGCGG GCTCGGCGTG CTGATCACCG ACCATAACGT CCGTGAGACG
CTGGCAGTCT GTGAACGCGC CTATATCGTG AGCCAGGGCC ACCTTATTGC CCACGGTACG
CCGACAGAAA TCCTGCAAGA CGAACACGTT AAGCGTGTAT ATCTTGGGGA AGACTTCAGA
CTCTGA
|
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| Protein sequence | MATLTAKNLA KAYKGRRVVE DVSLTVNSGE IVGLLGPNGA GKTTTFYMVV GIVPRDAGNI
IIDDEDISLL PLHARARRGI GYLPQEASIF RRLSVFDNLM AVLQIRDDLT AEQREDRANE
LMEEFHIEHL RDSMGQALSG GERRRVEIAR ALAANPKFIL LDEPFAGVDP ISVIDIKRII
EHLRDSGLGV LITDHNVRET LAVCERAYIV SQGHLIAHGT PTEILQDEHV KRVYLGEDFR
L
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