Gene SeD_A3669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3669 
Symbolttg2D 
ID6873824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3517780 
End bp3518415 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content53% 
IMG OID642786647 
Producttoluene tolerance protein Ttg2D 
Protein accessionYP_002217281 
Protein GI198243243 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.776684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0535124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAC GACTGATGAT GGTGGCCCTG CTGGTCATTG CGCCATTAAG CGCAGCAACG 
GCAGCGGATC AGAGCAATCC TTATAAACTG ATGAACGAGG CGGCGCAGAA AACGTTTGAT
CGCCTGAAAA ACGAACAGCC GAAAATTCGT GCCAATCCGG ATTACCTGCG AGACGTTGTT
GATCAGGAAC TTCTGCCGTA CGTGCAGGTA AAATATGCCG GCGCGCTGGT GTTGGGCCGC
TACTACAAAG AGGCGACCCC GGCGCAGCGT GAAGCCTATT TTGCCGCGTT TCGCGAATAC
CTGAAACAGG CATACGGTCA GGCGCTGGCG ATGTACCACG GTCAGACTTA CCAGATAGCG
CCTGAGCAAC CGCTGGGCGA TGCGACCATT GTGCCTATCC GTGTAACGAT TATCGATCCC
AACGGTCGTC CGCCGGTACG CCTGGATTTC CAGTGGCGCA AAAACACTCA GACCGGCAAC
TGGCAGGCGT ATGACATGAT TGCGGAAGGC GTCAGCATGA TCACCACCAA GCAAAATGAG
TGGAGCGATC TGCTGCGTAC TAAAGGCATC GACGGCCTGA CCGCACAACT GAAATCTATC
TCTCAACAGA AAATTACTTT GGACGAGAAA CAGTAA
 
Protein sequence
MFKRLMMVAL LVIAPLSAAT AADQSNPYKL MNEAAQKTFD RLKNEQPKIR ANPDYLRDVV 
DQELLPYVQV KYAGALVLGR YYKEATPAQR EAYFAAFREY LKQAYGQALA MYHGQTYQIA
PEQPLGDATI VPIRVTIIDP NGRPPVRLDF QWRKNTQTGN WQAYDMIAEG VSMITTKQNE
WSDLLRTKGI DGLTAQLKSI SQQKITLDEK Q