| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3655 |
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| Symbol | rrmJ |
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| ID | 6871621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3507571 |
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| End bp | 3508197 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642786635 |
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| Product | 23S rRNA methyltransferase J |
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| Protein accession | YP_002217269 |
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| Protein GI | 198244059 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000187779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.705737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGGTA AAAAGCGTTC TGCCAGCTCA AGCCGCTGGC TTCAGGAACA CTTTAGCGAT
AAATATGTTC AACAGGCGCA GAAAAAGGGG CTACGCTCCC GTGCCTGGTT TAAACTTGAT
GAAATACAGC AAAGTGACAA ACTTTTTAAG CCGGGAATGA CGGTAGTCGA TCTCGGCGCT
GCGCCAGGAG GCTGGTCACA GTATGTGGTC ACGCAGATTG GCGGCAAAGG CCGCATCATC
GCTTGTGATC TTTTACCTAT GGATCCTATC GTTGGTGTGG ACTTTCTTCA GGGCGATTTT
CGTGATGAAC TTGTCATGAA AGCGTTACTG GAACGCGTGG GTGACAGTAA AGTACAAGTT
GTCATGTCGG ATATGGCACC AAACATGAGC GGAACACCGG CGGTGGATAT CCCCCGCGCC
ATGTATCTGG TGGAGCTGGC GTTAGAGATG TGCCGCGATG TGCTGGCGCC AGGCGGAAGT
TTTGTAGTGA AGGTGTTCCA GGGCGAAGGT TTCGATGAGT ATCTAAGGGA AATTCGCTCC
CTGTTTACGA AGGTTAAAGT TCGTAAGCCG GACTCTTCGC GTGCGCGTTC GCGTGAAGTG
TACATTGTAG CGACCGGGCG AAAGTGA
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| Protein sequence | MTGKKRSASS SRWLQEHFSD KYVQQAQKKG LRSRAWFKLD EIQQSDKLFK PGMTVVDLGA
APGGWSQYVV TQIGGKGRII ACDLLPMDPI VGVDFLQGDF RDELVMKALL ERVGDSKVQV
VMSDMAPNMS GTPAVDIPRA MYLVELALEM CRDVLAPGGS FVVKVFQGEG FDEYLREIRS
LFTKVKVRKP DSSRARSREV YIVATGRK
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