Gene SeD_A3636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3636 
SymbolnlpI 
ID6872162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3489380 
End bp3490264 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID642786619 
Productlipoprotein NlpI 
Protein accessionYP_002217255 
Protein GI198242195 
COG category[R] General function prediction only 
COG ID[COG4785] Lipoprotein NlpI, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTT TTTTGCGCTG GTGTTTCGTT GCGACAGCAC TTACGCTTGC AGGATGCAGT 
AATTCCGCCT GGCGTAAAAG TGAAGTCCTC GCAGTACCAT TGCAACCGAC TTTACAGCAG 
GAAGTGATTC TGGCGCGTAT GGAACAGATT CTTGCCAGTC GGGCTTTAAC CGATGACGAA 
CGCGCACAGC TTTTATATGA GCGCGGAGTG TTGTATGATA GTCTTGGTTT GAGGGCATTA 
GCGCGAAATG ATTTTTCACA AGCGCTGGCA ATCAGACCGG ATATGCCTGA AGTATTCAAT 
TACTTAGGCA TTTATTTAAC GCAGGCAGGC AATTTTGATG CTGCCTATGA AGCGTTTGAT 
TCTGTACTAG AGCTTGATCC AACTTACAAC TACGCGCACT TAAACCGCGG TATCGCATTG 
TATTACGGCG GCCGTGATAA GTTAGCGCAA GATGATCTGC TGGCGTTTTA TCAAGACGAT 
CCCAATGATC CTTACCGCAG CCTGTGGCTG TATCTTGTTG AGCAGAAGCT TAATGAGAAG 
CAGGCGAAAG AAGCGTTAAA AGCACGCTTC GAAAAATCGG ATAAAGAGCA ATGGGGATGG 
AACATTGTCG AGTTCTACCT GGGCGACATT AGCGAAGCAA CGCTGATGGA AAGGCTCAAG 
GCGGACGCAA CGGATAACAC CTCGCTCGCT GAGCATCTCA GTGAAACCAA CTTCTATTTA 
GGTAAGTATT ACCTAAGTCT GGGGGATTTG GACAGCGCCA CGGCTCTGTT CAAACTGGCG 
GTGGCCAACA ACGTTCATAA CTTTGTTGAG CACCGATACG CATTGTTGGA ATTATCGCTC 
CTGGGCCAGG ACCAAGATGA CCTGGCAGAA TCGGACCAGC AATAG
 
Protein sequence
MKPFLRWCFV ATALTLAGCS NSAWRKSEVL AVPLQPTLQQ EVILARMEQI LASRALTDDE 
RAQLLYERGV LYDSLGLRAL ARNDFSQALA IRPDMPEVFN YLGIYLTQAG NFDAAYEAFD 
SVLELDPTYN YAHLNRGIAL YYGGRDKLAQ DDLLAFYQDD PNDPYRSLWL YLVEQKLNEK 
QAKEALKARF EKSDKEQWGW NIVEFYLGDI SEATLMERLK ADATDNTSLA EHLSETNFYL 
GKYYLSLGDL DSATALFKLA VANNVHNFVE HRYALLELSL LGQDQDDLAE SDQQ