Gene SeD_A3632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3632 
Symbol 
ID6874550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3484445 
End bp3485164 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content47% 
IMG OID642786615 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_002217251 
Protein GI198245601 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGTA AAGGACTACT CGCTATTGTA TTATTGAGCC TGTTTATCGC TTTTATTTTA 
AAATTTTTCT GGCTCACTCC GTACGATGAA GACGTTTACC TGCCAGTGGA AAAACCTGTC
GCATCGTCTT TAAAAATCAT TCACCCCGGC GACCAGTTAT TTATCCGCAT TCTGAAAGCG
GAAGATAAGC TGGAACTGTG GGCAAGCGCC AATAACAAGC CTTACAAACT CTACAAAACC
TGGACTATAT GCGCATGGTC TGGTGGCTTA GGGCCAAAAC ATAAACAGGG AGACGGTAAA
AGCCCGGAAG GCTTTTATGC CACCAACAAA GGGTTGCTTA ACCCAAACAG CCGCTATCAT
CTGGCATTTA ATATTGGCTA CCCGAATGCT TACGATCGGG CAAATGGCTA CACCGGTGAT
TTCATTATGG TTCACGGGAA CTGCGTTTCG GCCGGTTGCT ATGCCATGAC CGATGCCGGT
ATTGAAGAGA TTTATCAACT GGTGGCGCAG GCGCTAAACA GCGGGCAGAA GCGCGTGCCT
GTCCATATCT TCCCATTTAC GATGAATGAC GAAAATATGC GCCAGGCGCA AGCATGGCCG
GAATATAATT TCTGGCGTAT GTTGAAGCCC GGCTATGATT ACTTCGAAAA AAATCGCCGA
TTGCCAACCA TCACCGTTGA AAATCGGCGT TATAAAATCA GCCCAACAAC TCTTCCTTAA
 
Protein sequence
MGRKGLLAIV LLSLFIAFIL KFFWLTPYDE DVYLPVEKPV ASSLKIIHPG DQLFIRILKA 
EDKLELWASA NNKPYKLYKT WTICAWSGGL GPKHKQGDGK SPEGFYATNK GLLNPNSRYH
LAFNIGYPNA YDRANGYTGD FIMVHGNCVS AGCYAMTDAG IEEIYQLVAQ ALNSGQKRVP
VHIFPFTMND ENMRQAQAWP EYNFWRMLKP GYDYFEKNRR LPTITVENRR YKISPTTLP