Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3632 |
Symbol | |
ID | 6874550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3484445 |
End bp | 3485164 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642786615 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_002217251 |
Protein GI | 198245601 |
COG category | [S] Function unknown |
COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCGTA AAGGACTACT CGCTATTGTA TTATTGAGCC TGTTTATCGC TTTTATTTTA AAATTTTTCT GGCTCACTCC GTACGATGAA GACGTTTACC TGCCAGTGGA AAAACCTGTC GCATCGTCTT TAAAAATCAT TCACCCCGGC GACCAGTTAT TTATCCGCAT TCTGAAAGCG GAAGATAAGC TGGAACTGTG GGCAAGCGCC AATAACAAGC CTTACAAACT CTACAAAACC TGGACTATAT GCGCATGGTC TGGTGGCTTA GGGCCAAAAC ATAAACAGGG AGACGGTAAA AGCCCGGAAG GCTTTTATGC CACCAACAAA GGGTTGCTTA ACCCAAACAG CCGCTATCAT CTGGCATTTA ATATTGGCTA CCCGAATGCT TACGATCGGG CAAATGGCTA CACCGGTGAT TTCATTATGG TTCACGGGAA CTGCGTTTCG GCCGGTTGCT ATGCCATGAC CGATGCCGGT ATTGAAGAGA TTTATCAACT GGTGGCGCAG GCGCTAAACA GCGGGCAGAA GCGCGTGCCT GTCCATATCT TCCCATTTAC GATGAATGAC GAAAATATGC GCCAGGCGCA AGCATGGCCG GAATATAATT TCTGGCGTAT GTTGAAGCCC GGCTATGATT ACTTCGAAAA AAATCGCCGA TTGCCAACCA TCACCGTTGA AAATCGGCGT TATAAAATCA GCCCAACAAC TCTTCCTTAA
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Protein sequence | MGRKGLLAIV LLSLFIAFIL KFFWLTPYDE DVYLPVEKPV ASSLKIIHPG DQLFIRILKA EDKLELWASA NNKPYKLYKT WTICAWSGGL GPKHKQGDGK SPEGFYATNK GLLNPNSRYH LAFNIGYPNA YDRANGYTGD FIMVHGNCVS AGCYAMTDAG IEEIYQLVAQ ALNSGQKRVP VHIFPFTMND ENMRQAQAWP EYNFWRMLKP GYDYFEKNRR LPTITVENRR YKISPTTLP
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