Gene SeD_A3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3624 
Symbol 
ID6873280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3478879 
End bp3479397 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content54% 
IMG OID642786607 
Productintracellular peptidase, PfpI family 
Protein accessionYP_002217243 
Protein GI198243791 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGA AAATTGCCGT TTTGATTACC GATGAATTTG AAGATTCAGA ATTTACCTCG 
CCGGCAGCAG AATTCCGTCA GGCCGGCCAT GAGGTCATCA CCATCGAAAA AGAGGCGGGT
AAAACGGTGA AAGGAAAAAA AGGCGAGGCC AGCGTCACCA TTGATAAGGC TATTGATGAC
GTTCGTCCCG ACGAGTTCGA CGCCTTGCTA TTGCCGGGAG GTCATTCGCC GGACTACCTG
CGCGGCGACA GCCGTTTCGT GGATTTTACC CGCGATTTCG TTAACAGCGG TAAACCGGTT
TTTGCCATTT GCCACGGCCC ACAGTTGTTG ATCAGCGCCG ATGTCATTCG TGGCCGCAAA
CTCACGGCGG TGAAACCGAT TATTATCGAT GTGAAGAATG CGGGCGCGGA GTTTTACGAT
CAGGAAGTCG TCGTCGATAA AGATCAGCTG GTGACCAGCC GCACGCCTGA CGACCTGCCG
GCATTTAACC GCGAGGCGCT ACGCCTGCTG GGCGCGTGA
 
Protein sequence
MSKKIAVLIT DEFEDSEFTS PAAEFRQAGH EVITIEKEAG KTVKGKKGEA SVTIDKAIDD 
VRPDEFDALL LPGGHSPDYL RGDSRFVDFT RDFVNSGKPV FAICHGPQLL ISADVIRGRK
LTAVKPIIID VKNAGAEFYD QEVVVDKDQL VTSRTPDDLP AFNREALRLL GA