| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3601 |
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| Symbol | tdcC |
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| ID | 6871710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3457090 |
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| End bp | 3458421 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642786587 |
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| Product | threonine/serine transporter TdcC |
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| Protein accession | YP_002217223 |
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| Protein GI | 198241983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTA CTGATAGCAT TGTATCCAGC CAGGCAAAAC AGTCGTCATG GCGTAAATCG
GACACGACGT GGACGCTGGG TTTATTTGGT ACCGCCATCG GCGCCGGGGT GCTGTTTTTC
CCTATCCGCG CCGGGTTTGG CGGGCTTATC CCCATTCTGC TGATGCTGGT TTTAGCTTAC
CCCATTGCGT TCTATTGTCA CCGGGCGCTG GCGCGTCTGT GTTTATCCGG ATCTAATCCG
TCCGGCAATA TTACGGAAAC GGTCGAAGAG CACTTTGGTA AAACGGGCGG GGTAGTTATC
ACGTTCCTTT ACTTCTTTGC GATTTGTCCG CTGCTGTGGA TTTATGGCGT CACCATCACT
AACACGTTCA TGACGTTTTG GGAAAACCAG TTGCAGATGC CAGCGTTGAA TCGCGGTTTC
GTGGCGCTGT TCTTGCTGCT GCTGATGGCC TTTGTGATCT GGTTTGGTAA AGATCTGATG
GTTAAGGTGA TGAGTTACCT GGTATGGCCG TTTATCGCCA GTCTGGTGCT AATCTCATTA
TCGCTGATTC CTTACTGGAA CTCGGCGGTT ATCGATCAGG TTGATCTCAG TAATATCGCG
CTGACTGGGC ACGATGGCAT ACTGGTTACG GTGTGGCTGG GCATCTCTAT CATGGTGTTC
TCCTTTAACT TTTCGCCCAT CGTCTCTTCC TTCGTGGTGT CTAAGCGTGA AGAGTATGAG
AAAGAGTTTG GCCGCGAATT TACCGAGCGT AAATGTTCAC AGATCATCTC GCGCGCCAGT
ATGCTGATGG TCGCCGTGGT GATGTTCTTC GCCTTTAGCT GTCTGTTTAC GCTCTCCCCG
CAGAACATGG CGGATGCGAA AGCGCAGAAC ATTCCGGTAC TTTCCTACCT GGCTAACCAT
TTCGCCTCTT TGTCGGGGAC AAAATCTACT TTTGCAACGG TGCTGGAGTA TGGCGCGTCT
ATCATCGCGC TGGTTGCTAT TTTCAAATCT TTCTTCGGTC ACTACCTGGG GACGCTGGAA
GGGCTGAACG GCCTGGTGCT GAAATTCGGT TATAAAGGCG ATAAAACCAA AGTCTCTATG
GGCAAGCTTA ACACCATCAG CATGATCTTC ATTATGGGGT CTACCTGGGT CGTAGCTTAC
GCAAACCCGA ACATTCTGGA CCTGATTGAA GCGATGGGCG CGCCGATTAT CGCCTCGCTG
TTATGCCTGC TGCCGATGTA CGCCATTCGT AAAGCGCCGT CGCTGGCGAA GTACCGTGGT
CGTCTGGATA ACGTGTTCGT CACCCTGATT GGTCTGCTGA CCATCCTGAA TATTGTCTAC
AAATTGTTCT AA
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| Protein sequence | MSTTDSIVSS QAKQSSWRKS DTTWTLGLFG TAIGAGVLFF PIRAGFGGLI PILLMLVLAY
PIAFYCHRAL ARLCLSGSNP SGNITETVEE HFGKTGGVVI TFLYFFAICP LLWIYGVTIT
NTFMTFWENQ LQMPALNRGF VALFLLLLMA FVIWFGKDLM VKVMSYLVWP FIASLVLISL
SLIPYWNSAV IDQVDLSNIA LTGHDGILVT VWLGISIMVF SFNFSPIVSS FVVSKREEYE
KEFGREFTER KCSQIISRAS MLMVAVVMFF AFSCLFTLSP QNMADAKAQN IPVLSYLANH
FASLSGTKST FATVLEYGAS IIALVAIFKS FFGHYLGTLE GLNGLVLKFG YKGDKTKVSM
GKLNTISMIF IMGSTWVVAY ANPNILDLIE AMGAPIIASL LCLLPMYAIR KAPSLAKYRG
RLDNVFVTLI GLLTILNIVY KLF
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