Gene SeD_A3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3598 
Symbol 
ID6873337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3452053 
End bp3453417 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content57% 
IMG OID642786584 
ProductL-serine ammonia-lyase 
Protein accessionYP_002217220 
Protein GI198245356 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.842995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.929959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGCG CATTTGATAT TTTTAAGATT GGCATTGGAC CTTCAAGCTC CCATACCGTA 
GGGCCAATGA ATGCAGGAAA ATGTTTTATC GATCGGCTGA TCGACAGCGG CGACCTGCCG
CGAACGACGC GCATCACGGT TGATCTTTAC GGATCGCTAT CGCTGACGGG CAAAGGCCAC
GCGACCGATA CCGCCATCAT TATGGGCCTG GCGGGCAATA CGCCGCAGGA TGTCAATATT
GATAGCATTC CGGCGTTTAT CCAGGAGGTT GCCCGCAGCA GCCGTTTATC GGTGGCGGGT
GGCGCGCATG TGGTGGATTT TCCCGTCGCC GACAGTATTC TCTTTCACGC TGAAACCCTG
GCGCGCCATG AAAACGGTAT GCGTATTACC GCCTGGAACG GACAAGCGCC GCTTTTACAC
AAAACGTATT ACTCTATTGG CGGCGGCTTT ATTGTCGAAG AGGAGCGTTT TGGTCAGTCG
CACGACGTAG AAAAATCGGT GCCGTATGAT TTTCATTCCG CCAGCGAACT GTTGACGCTG
TGTGAAAGAC AGGGGCTCTC GGTTTCCGGC CTGATGATGC AAAATGAACT GGCGTTGCGG
AGCAAAGAGC AGATTGACGC TGGCTTTGCC CGCATCTGGC AGGTGATGGC GACCGGAATT
GAACGTGGCA TGAATACTGA GGGCGTGCTG CCGGGGCCGC TGAACGTTCC ACGCCGCGCG
GTAGCGTTAC GGCGTCTGCT GGTCTCCAGC GATAATCTCT CCCGCGATCC GATGAACGTC
ATTGACTGGA TTAACATGTT CGCCCTGGCC GTGAGCGAAG AGAACGCGGC GGGCGGGCGA
GTGGTCACCG CGCCGACCAA CGGCGCGTGC GGCATTATTC CCGCGGTGCT GGCCTATTAC
GACAAATTCC GTCGCCCGGT CAATGCCAAC TCTATCGCCC GCTATCTGCT GTCGGCGGGG
GCGATTGGCA TGCTGTACAA GATGAACGCC TCGATATCCG GCGCGGAAGT GGGGTGTCAG
GGTGAGGTTG GCGTCGCGTG TTCGATGGCG GCGGCGGGGC TGACAGAACT GCTGGGCGGC
AGCCCTGCGC AGGTCTGTAT TGCGGCGGAA ATTGCGATGG AGCATAACCT TGGCCTCACC
TGTGACCCGG TGGCGGGTCA GGTACAAATC CCTTGTATTG AACGTAATGC GATTAACGCC
GTTAAAGCGG TGAATGCGGC GCGAATGGCG CTACGCCGTA CCTCTGAGCC GCGGGTTTCG
CTCGATAAAG TGATCGAAAC CATGTACGAA ACGGGTAAAG ACATGAACGA CAAATATCGC
GAGACGTCGC GCGGCGGTCT GGCGATTAAA GTCGTTTGTG GATAG
 
Protein sequence
MISAFDIFKI GIGPSSSHTV GPMNAGKCFI DRLIDSGDLP RTTRITVDLY GSLSLTGKGH 
ATDTAIIMGL AGNTPQDVNI DSIPAFIQEV ARSSRLSVAG GAHVVDFPVA DSILFHAETL
ARHENGMRIT AWNGQAPLLH KTYYSIGGGF IVEEERFGQS HDVEKSVPYD FHSASELLTL
CERQGLSVSG LMMQNELALR SKEQIDAGFA RIWQVMATGI ERGMNTEGVL PGPLNVPRRA
VALRRLLVSS DNLSRDPMNV IDWINMFALA VSEENAAGGR VVTAPTNGAC GIIPAVLAYY
DKFRRPVNAN SIARYLLSAG AIGMLYKMNA SISGAEVGCQ GEVGVACSMA AAGLTELLGG
SPAQVCIAAE IAMEHNLGLT CDPVAGQVQI PCIERNAINA VKAVNAARMA LRRTSEPRVS
LDKVIETMYE TGKDMNDKYR ETSRGGLAIK VVCG