Gene SeD_A3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3596 
Symbol 
ID6871542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3449071 
End bp3450381 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content56% 
IMG OID642786582 
Productputative inner membrane protein 
Protein accessionYP_002217218 
Protein GI198244455 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.062569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.829318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAT CTAAAATAAA TCCATTGTGG CAAAGTTTTA TCCTGGCCGT ACAGGAAGAA 
GTAAAACCGG CGCTGGGGTG TACTGAGCCA ATTTCACTGG CGCTGGCGGC AGCGGCGGCG 
GCGGCTGAAC TTGACGGCAC AGTTGAACGC ATTGACGCGT GGGTTTCGCC TAATCTGATG 
AAAAATGGTA TGGGTGTTAC CGTTCCAGGA ACGGGAATGG TAGGGCTACC GATCGCCGCG 
GCGTTGGGCG CGTTGGGCGG TGATGCGAAA GCCGGGTTGG AGGTGTTAAA AGACGCTTCC 
GCTAAAGCCG TTGCCGATGC AAAAGCGATG CTGGCCGCTG GACATGTCGC GGTGATGTTG 
CAGGAGCCAT GTAACGATAT CCTGTTTTCA CGGGCGAAAG TGTATAGCGG CGATAGCTGG 
GCATGTGTCA CGATCGTCGG CGATCATACA AATATTGTGC GGATAGAAAC CAACAAGGGT 
GTGGTATTTA CCCAGGCCGA TAATGCGCAG GAAGAAGAAA AAAACTCGCC ACTGGGAGTG 
CTGTCTCATA CCTCGCTGGA AGAGATCCTG GCGTTTGTGA ATGCGGTGCC CTTTGACGCT 
ATTCGCTTTA TTCTCGATGC GGCCAGGCTA AACGGCGCGT TGTCGCAGGA GGGACTGCGT 
GGTTCCTGGG GGCTGCATAT CGGTTCGACG CTGGCCAAAC AGTGCGATCG CGGTCTGCTG 
GCGAAAGATC TCTCCACGGC GATTTTGATC CGTACCAGCG CGGCGTCAGA CGCCAGAATG 
GGCGGCGCCA CGTTGCCCGC GATGAGCAAC TCCGGTTCTG GCAACCAGGG GATTACCGCC 
ACGGTGCCAG TCATGGTGGT TGCTGAACAT GTCGGCGCCG ATGACGAGCG CCTGGCGCGC 
GCGCTAATGT TATCGCATTT GAGCGCTATC TATATTCACC ATCAGCTTCC GCGTTTGTCG 
GCTCTGTGCG CGGCAACCAC GGCGGCGATG GGCGCGGCGG CGGGTATGGC GTGGCTGATA 
GATGGTCGTT ACGACACTAT CGCAATGGCT ATCAGCAGTA TGATTGGTGA TGTCAGCGGG 
ATGATTTGCG ATGGCGCGTC GAATAGCTGC GCGATGAAAG TCTCTACCAG CGCGTCGGCG 
GCGTGGAAAG CCGTACTGAT GGCGTTGGAT GATACGGCGG TGACCGGAAA CGAAGGGATT 
GTGGCGCACA ATGTCGAACA ATCTATTGCG AATTTGTGTT CGCTGGCGTG TCGCTCAATG 
CAGCAGACAG ACAAGCAGAT CATCGAGATT ATGGCCAGTA AAGCGCATTA A
 
Protein sequence
MFESKINPLW QSFILAVQEE VKPALGCTEP ISLALAAAAA AAELDGTVER IDAWVSPNLM 
KNGMGVTVPG TGMVGLPIAA ALGALGGDAK AGLEVLKDAS AKAVADAKAM LAAGHVAVML 
QEPCNDILFS RAKVYSGDSW ACVTIVGDHT NIVRIETNKG VVFTQADNAQ EEEKNSPLGV 
LSHTSLEEIL AFVNAVPFDA IRFILDAARL NGALSQEGLR GSWGLHIGST LAKQCDRGLL 
AKDLSTAILI RTSAASDARM GGATLPAMSN SGSGNQGITA TVPVMVVAEH VGADDERLAR 
ALMLSHLSAI YIHHQLPRLS ALCAATTAAM GAAAGMAWLI DGRYDTIAMA ISSMIGDVSG 
MICDGASNSC AMKVSTSASA AWKAVLMALD DTAVTGNEGI VAHNVEQSIA NLCSLACRSM 
QQTDKQIIEI MASKAH