Gene SeD_A3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3593 
Symbol 
ID6873754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3447068 
End bp3447964 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content57% 
IMG OID642786579 
ProductLysR family transcriptional regulator 
Protein accessionYP_002217215 
Protein GI198243891 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.480915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.520178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG AGAGAGCGCT GACGCTTGAA GCATTGCGTG TGATGGACGC CATTGACCGC 
CGGGGCAGTT TTGCCGCAGC GGCTGATGAG TTGGGGCGGG TGCCCTCCGC GCTGAGTTAC 
ACCATGCAGA AGCTGGAAGA AGAGTTGGAC GTTGTACTGT TCGATCGCTC CGGCCATCGT 
ACAAAATTCA CCAACGTCGG ACGTATGCTG CTGGAACGCG GGCGGGTATT GCTGGAAGCG 
GCAGACAAGT TAACGACGGA TGCTGAAGCG TTGGCCCGCG GTTGGGAAAC GCATCTGACG 
CTGGTCACTG AAGCTCTGGT ACCGACGCCT GCTTTTTTTC CGCTGATCGA CCGGCTGGCC 
GCTAAAGCCA ATACGCAGCT TTCATTGATT ACCGAAGTAC TGGCTGGCGC ATGGGAGCGG 
CTTGAGCAGG GACGGGCGGA TATCGTTATC GCCCCGGATA TGCATTTTCG ATCGTCGTCG 
GAAATTAACT CCCGTAAGTT GTATTCGTTA ATGAATGTGT ATGTCGCCGC GCCTGACCAC 
CCTATTCATC AGGAGCCGGA GCCGCTTTCG GAAGTGACGC GGGTTAAATA CCGCGGCGTA 
GCGGTAGCGG ATACCGCGCG CGAGCGGCCG GTATTAACGG TGCAACTGCT GGATAAGCAG 
CCACGTCTGA CGGTAAGCAC GATTGAAGAT AAACGTCAGG CGCTGCTGGC CGGGCTTGGC 
GTCGCGACTA TGCCATATTC GATGGTGGAA CAGGATATTG CCGAAGGGCG GCTACGCGTG 
GTCAGCCCGG AATCGACCAG CGAAATCGAT ATTATTATGG CCTGGCGGCG CGACAGTATG 
GGGGAGGCAA AAGCCTGGTG CCTGCGGGAA ATACCTAAGC TATTCGCCGG AAAATAA
 
Protein sequence
MAKERALTLE ALRVMDAIDR RGSFAAAADE LGRVPSALSY TMQKLEEELD VVLFDRSGHR 
TKFTNVGRML LERGRVLLEA ADKLTTDAEA LARGWETHLT LVTEALVPTP AFFPLIDRLA 
AKANTQLSLI TEVLAGAWER LEQGRADIVI APDMHFRSSS EINSRKLYSL MNVYVAAPDH 
PIHQEPEPLS EVTRVKYRGV AVADTARERP VLTVQLLDKQ PRLTVSTIED KRQALLAGLG 
VATMPYSMVE QDIAEGRLRV VSPESTSEID IIMAWRRDSM GEAKAWCLRE IPKLFAGK