Gene SeD_A3592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3592 
Symbol 
ID6871847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3446664 
End bp3447029 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content52% 
IMG OID642786578 
Productinner membrane protein YhaH 
Protein accessionYP_002217214 
Protein GI198244373 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.532788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.457416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGT ATTTAAAGGT TTTAAAAAAT TATCTGGGAT TTGGCGGCCA CGCGCGACGC 
AAAGAGTACT GGATGTTTAT TCTGGTCAAT ATCATCTTTA CCTTTGTGTT GGGCCTGCTG 
GACGCCATGC TTGGCTGGCA ACGCGCCGGG GGTGAAGGCA TTCTGACCAC CATTTACGGC 
GTTCTGATCT TTTTACCGTG GTGGGCCGTG CAGTTCCGTC GTCTGCATGA CACTGACCGC 
TCCGCATGGT GGCTACTGTT GCTACTTATC CCCATTATCG GCTGGCTTAT CATCATCGCG 
TTCAACTGCC AGAATGGTAC GCCGGGCGAC AACCGCTTCG GCCCCGATCC GAAACGTTTT 
TCCTGA
 
Protein sequence
MDWYLKVLKN YLGFGGHARR KEYWMFILVN IIFTFVLGLL DAMLGWQRAG GEGILTTIYG 
VLIFLPWWAV QFRRLHDTDR SAWWLLLLLI PIIGWLIIIA FNCQNGTPGD NRFGPDPKRF 
S