Gene SeD_A3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3582 
Symbol 
ID6871372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3440547 
End bp3441791 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content56% 
IMG OID642786570 
Productserine/threonine transporter SstT 
Protein accessionYP_002217206 
Protein GI198244386 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0998274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGC AACGAGCATC AGGGCTACTG CAGCGTTTAG CGCAAGGCAG TCTGGTTAAA 
CAAATTTTAG TGGGTCTGAT ACTGGGGATT TTACTGGCAT GGATTTCTAA GCCTGCGGCA 
GAAGCGGTTG GCTTGCTTGG CACCCTGTTC GTCGGCGCCT TAAAAGCGGT CGCCCCCGTT 
CTGGTGCTGA TGCTGGTAAT GGCCTCGATC GCCAACCACC AGCACGGCCA AAAAACCAAT 
ATTCGCCCTA TTCTCTTTCT TTACCTGCTA GGCACCTTTT CAGCCGCGCT GGCGGCCGTT 
GTGTTCAGCT TCGCCTTCCC TTCAACGCTG CATCTGTCCA GTAGCGCCCA GGATATCGTG 
CCGCCGTCCG GCATTGTAGA AGTCTTGCGC GGTCTGCTGA TGAGCATGGT GTCGAACCCC 
ATCGACGCGC TGCTGAACGC TAACTATATC GGGATTCTGG TGTGGGCCGT CGGTCTGGGA 
TTTGCCCTGC GTCATGGCAA TGAAACCACC AAAAACCTCG TGAACGATAT GTCTAACGCC 
GTGACCTTTA TGGTGAAACT GGTGATCCGT TTCGCGCCAG TCGGTATTTT TGGTCTGGTT 
TCATCAACGC TTGCAACCAC CGGCTTCTCT ACCCTGTGGG GTTATGCGCA CCTGCTGGTC 
GTCTTGATTG GCTGTATGCT GCTGGTCGCG CTGGTGGTCA ACCCGCTGTT GGTATTCTGG 
AAAATTCGTC GCAACCCTTA TCCGCTGGTG TTCGCCTGCC TGCGTGAAAG CGGCGTTTAT 
GCCTTCTTTA CCCGCAGCTC TGCCGCCAAT ATTCCAGTGA ATATGGCGCT GTGCGAAAAG 
CTGAATCTGG ACAGGGATAC TTACTCCGTT TCCATTCCGC TGGGCGCCAC TATCAATATG 
GCCGGCGCGG CAATTACCAT TACGGTTCTG ACGTTGGCGG CAGTCCATAC GTTAGGCGTC 
CCGGTGGATC TGCCTACAGC GCTGCTGCTG AGCGTGGTGG CCTCGCTGTG TGCTTGCGGC 
GCCTCCGGCG TGGCAGGCGG TTCATTGCTG CTGATCCCGC TGGCGTGCAA CATGTTTGGC 
ATCCCGAACG ATATCGCGAT GCAGGTAGTA GCGGTCGGCT TTATTATCGG CGTATTGCAG 
GATTCGTGTG AAACGGCGCT GAACTCGTCT ACCGATGTTC TGTTCACTGC GGCAGCCTGC 
CAGGCAGAGG ACGAACGTCT GGCGAATAAC GCCTTGCGTA GCTAA
 
Protein sequence
MATQRASGLL QRLAQGSLVK QILVGLILGI LLAWISKPAA EAVGLLGTLF VGALKAVAPV 
LVLMLVMASI ANHQHGQKTN IRPILFLYLL GTFSAALAAV VFSFAFPSTL HLSSSAQDIV 
PPSGIVEVLR GLLMSMVSNP IDALLNANYI GILVWAVGLG FALRHGNETT KNLVNDMSNA 
VTFMVKLVIR FAPVGIFGLV SSTLATTGFS TLWGYAHLLV VLIGCMLLVA LVVNPLLVFW 
KIRRNPYPLV FACLRESGVY AFFTRSSAAN IPVNMALCEK LNLDRDTYSV SIPLGATINM 
AGAAITITVL TLAAVHTLGV PVDLPTALLL SVVASLCACG ASGVAGGSLL LIPLACNMFG 
IPNDIAMQVV AVGFIIGVLQ DSCETALNSS TDVLFTAAAC QAEDERLANN ALRS